Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 CUL4AP1-201ENST00000514750 1863 ntBASIC4.77□□□□□ -1.65
CSNK1A1P48729 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CSNK1A1P48729 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CSNK1A1P48729 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1A1P48729 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 AC008079.2-201ENST00000623543 20396 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1A1P48729 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1A1P48729 MIR133B-201ENST00000362210 119 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 RNA5SP242-201ENST00000364171 118 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 RNA5SP487-201ENST00000410186 122 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 GABARAPL3-201ENST00000412799 354 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 AC017019.1-201ENST00000426129 261 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 AC016772.1-201ENST00000444170 1261 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 RN7SL547P-201ENST00000490793 290 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 AL136038.1-201ENST00000497246 351 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 RPS24P16-201ENST00000497294 392 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1A1P48729 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1A1P48729 AC020978.7-201ENST00000575953 1187 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 SNORD95-201ENST00000579879 68 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 SUGT1P3-202ENST00000604259 383 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 AC096586.2-201ENST00000610260 441 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1A1P48729 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1A1P48729 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CSNK1A1P48729 AP003400.3-201ENST00000624904 346 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 SAMMSON-209ENST00000641222 1100 ntBASIC4.76□□□□□ -1.65
CSNK1A1P48729 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CSNK1A1P48729 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1A1P48729 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1A1P48729 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1A1P48729 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 AL078621.3-201ENST00000623707 2042 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1A1P48729 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1A1P48729 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1A1P48729 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1A1P48729 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1A1P48729 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1A1P48729 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1A1P48729 RNA5SP335-201ENST00000363817 110 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 RNU6-729P-201ENST00000384399 107 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 RNA5SP296-201ENST00000410523 111 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 DSTNP5-201ENST00000427921 523 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 RPL7AP49-201ENST00000429522 581 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 AL591438.1-201ENST00000433508 581 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 RPL19P16-201ENST00000433839 588 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 RPL7P45-201ENST00000455851 743 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 AC022360.1-201ENST00000521058 340 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1A1P48729 RBM22P1-201ENST00000578589 1214 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 RN7SL290P-201ENST00000578661 300 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 AP002884.5-201ENST00000595053 1132 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 AC005252.1-201ENST00000604518 1063 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 AL161912.3-201ENST00000605404 628 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 AC074101.1-201ENST00000637861 241 ntBASIC4.75□□□□□ -1.65
CSNK1A1P48729 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CSNK1A1P48729 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CSNK1A1P48729 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CSNK1A1P48729 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CSNK1A1P48729 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms