Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.18□□□□□ -1.58
SOX2P48431 CIR1P2-201ENST00000514821 1342 ntBASIC5.18□□□□□ -1.58
SOX2P48431 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SOX2P48431 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SOX2P48431 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SOX2P48431 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.18□□□□□ -1.58
SOX2P48431 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.18□□□□□ -1.58
SOX2P48431 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.18□□□□□ -1.58
SOX2P48431 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.17□□□□□ -1.58
SOX2P48431 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 AC022306.1-201ENST00000560489 1562 ntBASIC5.17□□□□□ -1.58
SOX2P48431 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
SOX2P48431 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX2P48431 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 RNU6-236P-201ENST00000363886 106 ntBASIC5.17□□□□□ -1.58
SOX2P48431 RNA5SP211-201ENST00000365516 117 ntBASIC5.17□□□□□ -1.58
SOX2P48431 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
SOX2P48431 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX2P48431 MIR513B-201ENST00000385136 84 ntBASIC5.17□□□□□ -1.58
SOX2P48431 MIR431-201ENST00000385266 114 ntBASIC5.17□□□□□ -1.58
SOX2P48431 HMGB1P13-201ENST00000406019 642 ntBASIC5.17□□□□□ -1.58
SOX2P48431 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.17□□□□□ -1.58
SOX2P48431 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX2P48431 RPL35AP31-201ENST00000418340 337 ntBASIC5.17□□□□□ -1.58
SOX2P48431 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX2P48431 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.17□□□□□ -1.58
SOX2P48431 OR2X1P-201ENST00000421144 687 ntBASIC5.17□□□□□ -1.58
SOX2P48431 RPL7AP14-201ENST00000424041 802 ntBASIC5.17□□□□□ -1.58
SOX2P48431 RPL12P12-201ENST00000424633 501 ntBASIC5.17□□□□□ -1.58
SOX2P48431 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 NAP1L4P2-201ENST00000425958 899 ntBASIC5.17□□□□□ -1.58
SOX2P48431 CRIP1P1-201ENST00000427567 185 ntBASIC5.17□□□□□ -1.58
SOX2P48431 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX2P48431 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.17□□□□□ -1.58
SOX2P48431 GTF2IP3-201ENST00000433887 494 ntBASIC5.17□□□□□ -1.58
SOX2P48431 AC128677.1-201ENST00000436016 442 ntBASIC5.17□□□□□ -1.58
SOX2P48431 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SOX2P48431 AL663074.2-201ENST00000440621 479 ntBASIC5.17□□□□□ -1.58
SOX2P48431 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX2P48431 AL031681.1-201ENST00000443304 400 ntBASIC5.17□□□□□ -1.58
SOX2P48431 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX2P48431 SEPT14P24-201ENST00000447236 180 ntBASIC5.17□□□□□ -1.58
SOX2P48431 TRY2P-201ENST00000448860 689 ntBASIC5.17□□□□□ -1.58
SOX2P48431 AC239798.3-201ENST00000454459 408 ntBASIC5.17□□□□□ -1.58
SOX2P48431 Z83838.1-202ENST00000456225 839 ntBASIC5.17□□□□□ -1.58
SOX2P48431 GTF2IP12-201ENST00000456547 356 ntBASIC5.17□□□□□ -1.58
SOX2P48431 NAP1L1P3-201ENST00000462291 880 ntBASIC5.17□□□□□ -1.58
SOX2P48431 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SOX2P48431 AP003385.3-201ENST00000472498 287 ntBASIC5.17□□□□□ -1.58
SOX2P48431 RN7SL502P-201ENST00000481857 290 ntBASIC5.17□□□□□ -1.58
SOX2P48431 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX2P48431 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.17□□□□□ -1.58
SOX2P48431 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX2P48431 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX2P48431 MIR2117-201ENST00000516780 80 ntBASIC5.17□□□□□ -1.58
SOX2P48431 RNU6-1308P-201ENST00000516817 103 ntBASIC5.17□□□□□ -1.58
SOX2P48431 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.17□□□□□ -1.58
SOX2P48431 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX2P48431 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.17□□□□□ -1.58
SOX2P48431 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX2P48431 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX2P48431 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 OR8Q1P-201ENST00000526467 655 ntBASIC5.17□□□□□ -1.58
SOX2P48431 AP004607.5-201ENST00000532034 217 ntBASIC5.17□□□□□ -1.58
SOX2P48431 SLC25A51P2-201ENST00000535708 889 ntBASIC5.17□□□□□ -1.58
SOX2P48431 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.17□□□□□ -1.58
SOX2P48431 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.17□□□□□ -1.58
SOX2P48431 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.17□□□□□ -1.58
SOX2P48431 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.17□□□□□ -1.58
SOX2P48431 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.17□□□□□ -1.58
SOX2P48431 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.17□□□□□ -1.58
SOX2P48431 AC145350.1-201ENST00000567426 208 ntBASIC5.17□□□□□ -1.58
SOX2P48431 MTND3P13-201ENST00000574391 343 ntBASIC5.17□□□□□ -1.58
SOX2P48431 AC090774.2-201ENST00000584708 322 ntBASIC5.17□□□□□ -1.58
SOX2P48431 CCDC58P3-201ENST00000590792 430 ntBASIC5.17□□□□□ -1.58
SOX2P48431 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX2P48431 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.17□□□□□ -1.58
SOX2P48431 AC006115.2-201ENST00000596823 202 ntBASIC5.17□□□□□ -1.58
SOX2P48431 AC018618.2-201ENST00000604770 446 ntBASIC5.17□□□□□ -1.58
SOX2P48431 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SOX2P48431 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SOX2P48431 AC096861.1-201ENST00000616652 240 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms