Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.74□□□□□ -1.65
CDX1P47902 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.74□□□□□ -1.65
CDX1P47902 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.74□□□□□ -1.65
CDX1P47902 MIR132-201ENST00000591554 101 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.74□□□□□ -1.65
CDX1P47902 AC005972.3-201ENST00000606304 481 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AC108865.2-201ENST00000606881 432 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AC023813.4-201ENST00000607580 580 ntBASIC4.74□□□□□ -1.65
CDX1P47902 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.74□□□□□ -1.65
CDX1P47902 AL096712.1-201ENST00000614561 159 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AC096861.1-201ENST00000616652 240 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.74□□□□□ -1.65
CDX1P47902 AL137067.2-201ENST00000621202 131 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AL359742.1-201ENST00000622497 540 ntBASIC4.74□□□□□ -1.65
CDX1P47902 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDX1P47902 FO681491.1-202ENST00000623392 737 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AP003497.2-201ENST00000624220 967 ntBASIC4.74□□□□□ -1.65
CDX1P47902 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.74□□□□□ -1.65
CDX1P47902 AC003992.1-201ENST00000635364 557 ntBASIC4.74□□□□□ -1.65
CDX1P47902 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CDX1P47902 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CDX1P47902 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CDX1P47902 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
CDX1P47902 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.74□□□□□ -1.65
CDX1P47902 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.74□□□□□ -1.65
CDX1P47902 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
CDX1P47902 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CDX1P47902 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDX1P47902 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CDX1P47902 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CDX1P47902 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CDX1P47902 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.73□□□□□ -1.65
CDX1P47902 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CDX1P47902 AC008627.1-201ENST00000517511 1704 ntBASIC4.73□□□□□ -1.65
CDX1P47902 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CDX1P47902 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 RN7SKP15-201ENST00000364742 309 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.73□□□□□ -1.65
CDX1P47902 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CDX1P47902 MIR320B1-201ENST00000390209 79 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AL096829.1-201ENST00000413677 457 ntBASIC4.73□□□□□ -1.65
CDX1P47902 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.73□□□□□ -1.65
CDX1P47902 MORF4L1P7-201ENST00000426038 703 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.73□□□□□ -1.65
CDX1P47902 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 TUBB4BP6-201ENST00000437576 479 ntBASIC4.73□□□□□ -1.65
CDX1P47902 DNAJA1P5-201ENST00000440278 943 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.73□□□□□ -1.65
CDX1P47902 AC012512.1-201ENST00000446594 718 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.73□□□□□ -1.65
CDX1P47902 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.73□□□□□ -1.65
CDX1P47902 PDCL3P4-201ENST00000489621 720 ntBASIC4.73□□□□□ -1.65
CDX1P47902 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 AC083795.1-201ENST00000491760 320 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.73□□□□□ -1.65
CDX1P47902 AL158068.1-201ENST00000506116 616 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.73□□□□□ -1.65
CDX1P47902 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 RN7SKP238-201ENST00000516483 249 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.73□□□□□ -1.65
CDX1P47902 OR56A7P-201ENST00000524865 941 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.73□□□□□ -1.65
CDX1P47902 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.73□□□□□ -1.65
CDX1P47902 AC084824.2-201ENST00000548906 345 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.73□□□□□ -1.65
CDX1P47902 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.73□□□□□ -1.65
CDX1P47902 AC127381.1-201ENST00000555979 939 ntBASIC4.73□□□□□ -1.65
CDX1P47902 SULT1C2P2-201ENST00000562517 294 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AL390726.5-202ENST00000564800 256 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.73□□□□□ -1.65
CDX1P47902 AC005244.1-201ENST00000582566 339 ntBASIC4.73□□□□□ -1.65
CDX1P47902 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.73□□□□□ -1.65
CDX1P47902 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.73□□□□□ -1.65
CDX1P47902 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.73□□□□□ -1.65
CDX1P47902 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.73□□□□□ -1.65
CDX1P47902 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.73□□□□□ -1.65
CDX1P47902 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CDX1P47902 HDAC1P2-201ENST00000453661 1398 ntBASIC4.73□□□□□ -1.65
CDX1P47902 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.73□□□□□ -1.65
CDX1P47902 AL512283.1-201ENST00000606756 1384 ntBASIC4.73□□□□□ -1.65
CDX1P47902 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.73□□□□□ -1.65
CDX1P47902 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 AC025574.1-201ENST00000554784 1653 ntBASIC4.73□□□□□ -1.65
CDX1P47902 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.73□□□□□ -1.65
CDX1P47902 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 ZNF90P1-201ENST00000480493 1951 ntBASIC4.73□□□□□ -1.65
CDX1P47902 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDX1P47902 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.72□□□□□ -1.65
CDX1P47902 RBPJP7-201ENST00000442803 1447 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms