Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD4P46934 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD4P46934 OR8V1P-201ENST00000395193 873 ntBASIC6.1□□□□□ -1.43
NEDD4P46934 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.1□□□□□ -1.43
NEDD4P46934 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.1□□□□□ -1.43
NEDD4P46934 BX323845.1-201ENST00000432417 179 ntBASIC6.1□□□□□ -1.43
NEDD4P46934 OR52E3P-201ENST00000452083 936 ntBASIC6.1□□□□□ -1.43
NEDD4P46934 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.1□□□□□ -1.43
NEDD4P46934 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.1□□□□□ -1.43
NEDD4P46934 AC008638.1-201ENST00000506035 866 ntBASIC6.1□□□□□ -1.43
NEDD4P46934 IGLV2-28-201ENST00000520681 304 ntBASIC6.1□□□□□ -1.43
NEDD4P46934 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.1□□□□□ -1.43
NEDD4P46934 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.1□□□□□ -1.43
NEDD4P46934 AC022884.2-201ENST00000578535 580 ntBASIC6.1□□□□□ -1.43
NEDD4P46934 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.1□□□□□ -1.43
NEDD4P46934 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.1□□□□□ -1.43
NEDD4P46934 AC092944.2-201ENST00000605443 889 ntBASIC6.1□□□□□ -1.43
NEDD4P46934 AL445222.1-201ENST00000607259 628 ntBASIC6.1□□□□□ -1.43
NEDD4P46934 AC135068.12-201ENST00000637370 931 ntBASIC6.1□□□□□ -1.43
NEDD4P46934 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
NEDD4P46934 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD4P46934 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD4P46934 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.1□□□□□ -1.43
NEDD4P46934 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD4P46934 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD4P46934 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
NEDD4P46934 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD4P46934 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
NEDD4P46934 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.09□□□□□ -1.43
NEDD4P46934 AC018765.1-201ENST00000623357 3446 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD4P46934 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
NEDD4P46934 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD4P46934 SNURFL-201ENST00000309296 343 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 RNA5SP223-201ENST00000365174 120 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.09□□□□□ -1.43
NEDD4P46934 SNORA48.4-201ENST00000391089 134 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 RNU4-34P-201ENST00000410431 124 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 COX5BP7-201ENST00000414780 274 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 AL161722.2-201ENST00000434731 981 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.09□□□□□ -1.43
NEDD4P46934 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.09□□□□□ -1.43
NEDD4P46934 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.09□□□□□ -1.43
NEDD4P46934 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.09□□□□□ -1.43
NEDD4P46934 AC098976.1-201ENST00000513014 541 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.09□□□□□ -1.43
NEDD4P46934 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.09□□□□□ -1.43
NEDD4P46934 AC022832.1-201ENST00000530718 645 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.09□□□□□ -1.43
NEDD4P46934 AC016180.1-201ENST00000567945 403 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 PRPF19P1-201ENST00000584766 898 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 AC006116.3-201ENST00000592968 361 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.09□□□□□ -1.43
NEDD4P46934 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.09□□□□□ -1.43
NEDD4P46934 AL627230.1-201ENST00000613077 211 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 AL591926.8-201ENST00000616876 211 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 AC010809.3-201ENST00000621310 641 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.09□□□□□ -1.43
NEDD4P46934 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.09□□□□□ -1.43
NEDD4P46934 SAMMSON-227ENST00000642114 1199 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.09□□□□□ -1.43
NEDD4P46934 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.09□□□□□ -1.43
NEDD4P46934 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD4P46934 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.09□□□□□ -1.43
NEDD4P46934 AC011755.1-201ENST00000623763 2049 ntBASIC6.09□□□□□ -1.43
NEDD4P46934 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.09□□□□□ -1.43
NEDD4P46934 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
NEDD4P46934 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
NEDD4P46934 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.09□□□□□ -1.44
NEDD4P46934 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NEDD4P46934 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NEDD4P46934 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.44
NEDD4P46934 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.09□□□□□ -1.44
NEDD4P46934 AP005432.1-201ENST00000580891 3485 ntBASIC6.08□□□□□ -1.44
NEDD4P46934 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.08□□□□□ -1.44
NEDD4P46934 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.08□□□□□ -1.44
NEDD4P46934 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NEDD4P46934 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.08□□□□□ -1.44
NEDD4P46934 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
NEDD4P46934 AC211486.3-201ENST00000412694 621 ntBASIC6.08□□□□□ -1.44
NEDD4P46934 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.08□□□□□ -1.44
NEDD4P46934 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.08□□□□□ -1.44
NEDD4P46934 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.08□□□□□ -1.44
NEDD4P46934 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.08□□□□□ -1.44
NEDD4P46934 RPL34P20-201ENST00000442771 351 ntBASIC6.08□□□□□ -1.44
NEDD4P46934 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.08□□□□□ -1.44
NEDD4P46934 AC110775.1-201ENST00000513721 462 ntBASIC6.08□□□□□ -1.44
NEDD4P46934 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.08□□□□□ -1.44
NEDD4P46934 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.08□□□□□ -1.44
NEDD4P46934 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.08□□□□□ -1.44
NEDD4P46934 AL359219.2-201ENST00000555184 348 ntBASIC6.08□□□□□ -1.44
NEDD4P46934 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.08□□□□□ -1.44
NEDD4P46934 NPM1P45-201ENST00000583151 559 ntBASIC6.08□□□□□ -1.44
NEDD4P46934 AC099494.2-201ENST00000623371 978 ntBASIC6.08□□□□□ -1.44
NEDD4P46934 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.08□□□□□ -1.44
NEDD4P46934 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NEDD4P46934 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NEDD4P46934 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
NEDD4P46934 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NEDD4P46934 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms