Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HOXC8P31273 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC8P31273 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC8P31273 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC8P31273 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC8P31273 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC8P31273 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC8P31273 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC8P31273 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC8P31273 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC8P31273 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC8P31273 CHMP1B2P-201ENST00000399581 597 ntBASIC5.87□□□□□ -1.47
HOXC8P31273 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HOXC8P31273 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC8P31273 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC8P31273 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HOXC8P31273 REREP1Y-201ENST00000422655 198 ntBASIC5.87□□□□□ -1.47
HOXC8P31273 RPS4XP16-201ENST00000427198 791 ntBASIC5.87□□□□□ -1.47
HOXC8P31273 REREP2Y-201ENST00000439103 200 ntBASIC5.87□□□□□ -1.47
HOXC8P31273 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC8P31273 AC239798.3-201ENST00000454459 408 ntBASIC5.87□□□□□ -1.47
HOXC8P31273 AC097484.1-201ENST00000471148 389 ntBASIC5.87□□□□□ -1.47
HOXC8P31273 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC8P31273 AC004980.4-201ENST00000513375 203 ntBASIC5.87□□□□□ -1.47
HOXC8P31273 RN7SKP147-201ENST00000517154 244 ntBASIC5.87□□□□□ -1.47
HOXC8P31273 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC8P31273 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC8P31273 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.87□□□□□ -1.47
HOXC8P31273 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC8P31273 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC8P31273 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.87□□□□□ -1.47
HOXC8P31273 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HOXC8P31273 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC8P31273 AC114774.1-201ENST00000507410 1770 ntBASIC5.87□□□□□ -1.47
HOXC8P31273 AL442128.2-201ENST00000620246 1824 ntBASIC5.87□□□□□ -1.47
HOXC8P31273 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC8P31273 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC8P31273 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC8P31273 AC232271.1-201ENST00000602455 2715 ntBASIC5.87□□□□□ -1.47
HOXC8P31273 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC8P31273 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC8P31273 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC8P31273 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC8P31273 THAP12P4-201ENST00000528321 2266 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC8P31273 AC092747.4-201ENST00000620519 1861 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC8P31273 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC8P31273 AC245100.2-201ENST00000454544 1679 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC8P31273 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC8P31273 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC8P31273 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC8P31273 U3.10-201ENST00000364459 214 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 SNORA70.9-201ENST00000384370 135 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 MIR1182-201ENST00000408363 97 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC8P31273 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC8P31273 AL392003.1-201ENST00000434394 243 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC8P31273 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC8P31273 AC092647.3-201ENST00000443044 633 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC8P31273 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC8P31273 AC079168.1-201ENST00000458741 345 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC8P31273 RPL37AP8-201ENST00000494116 276 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC8P31273 SCARNA20.4-201ENST00000516969 131 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC8P31273 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC8P31273 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.86□□□□□ -1.47
HOXC8P31273 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC8P31273 FAM25E-202ENST00000608562 189 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 MIR6748-201ENST00000610433 71 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 AC073342.3-201ENST00000624211 193 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC8P31273 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HOXC8P31273 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC8P31273 AL359715.3-201ENST00000569267 2123 ntBASIC5.86□□□□□ -1.47
HOXC8P31273 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC8P31273 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC8P31273 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC8P31273 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC8P31273 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HOXC8P31273 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HOXC8P31273 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC8P31273 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HOXC8P31273 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC8P31273 RN7SKP216-201ENST00000411050 312 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.85□□□□□ -1.47
HOXC8P31273 RPA2P2-201ENST00000419698 796 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC8P31273 AC012497.1-201ENST00000429392 575 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 RAD1P2-201ENST00000446414 663 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 KNOP1P3-201ENST00000446933 426 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 REG1CP-206ENST00000447469 496 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXC8P31273 RPL7P40-201ENST00000481703 745 ntBASIC5.85□□□□□ -1.47
HOXC8P31273 PPP1R11P1-201ENST00000486095 376 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms