Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
VARSP26640 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.58□□□□□ -1.2
VARSP26640 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.58□□□□□ -1.2
VARSP26640 DDX18P6-201ENST00000450119 1997 ntBASIC7.58□□□□□ -1.2
VARSP26640 AP002907.1-201ENST00000606361 1430 ntBASIC7.58□□□□□ -1.2
VARSP26640 OR2A3P-202ENST00000641249 1776 ntBASIC7.58□□□□□ -1.2
VARSP26640 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VARSP26640 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.58□□□□□ -1.2
VARSP26640 AC104083.1-201ENST00000569449 2615 ntBASIC7.58□□□□□ -1.2
VARSP26640 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VARSP26640 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
VARSP26640 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VARSP26640 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
VARSP26640 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
VARSP26640 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
VARSP26640 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
VARSP26640 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.57□□□□□ -1.2
VARSP26640 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
VARSP26640 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.57□□□□□ -1.2
VARSP26640 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 OR4A15-201ENST00000314706 1035 ntBASIC7.57□□□□□ -1.2
VARSP26640 OR56A4-201ENST00000330728 1209 ntBASIC7.57□□□□□ -1.2
VARSP26640 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.57□□□□□ -1.2
VARSP26640 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 RNU6-1339P-201ENST00000363574 91 ntBASIC7.57□□□□□ -1.2
VARSP26640 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 RNU4-31P-201ENST00000384211 141 ntBASIC7.57□□□□□ -1.2
VARSP26640 RNU6-809P-201ENST00000384461 107 ntBASIC7.57□□□□□ -1.2
VARSP26640 RNU6-1105P-201ENST00000384774 107 ntBASIC7.57□□□□□ -1.2
VARSP26640 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
VARSP26640 H2AFZP3-201ENST00000394213 387 ntBASIC7.57□□□□□ -1.2
VARSP26640 AL356057.3-201ENST00000402607 340 ntBASIC7.57□□□□□ -1.2
VARSP26640 RNU2-5P-201ENST00000410533 180 ntBASIC7.57□□□□□ -1.2
VARSP26640 RNU2-62P-201ENST00000410868 191 ntBASIC7.57□□□□□ -1.2
VARSP26640 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.57□□□□□ -1.2
VARSP26640 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC7.57□□□□□ -1.2
VARSP26640 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.57□□□□□ -1.2
VARSP26640 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC7.57□□□□□ -1.2
VARSP26640 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.57□□□□□ -1.2
VARSP26640 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.57□□□□□ -1.2
VARSP26640 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7.57□□□□□ -1.2
VARSP26640 SALL1P1-201ENST00000438101 3837 ntBASIC7.57□□□□□ -1.2
VARSP26640 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.57□□□□□ -1.2
VARSP26640 FTH1P7-201ENST00000450676 552 ntBASIC7.57□□□□□ -1.2
VARSP26640 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.57□□□□□ -1.2
VARSP26640 RN7SL870P-201ENST00000460111 296 ntBASIC7.57□□□□□ -1.2
VARSP26640 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 RPL36AP51-201ENST00000487216 318 ntBASIC7.57□□□□□ -1.2
VARSP26640 AC090096.1-201ENST00000489168 390 ntBASIC7.57□□□□□ -1.2
VARSP26640 AC127024.1-201ENST00000490847 418 ntBASIC7.57□□□□□ -1.2
VARSP26640 RN7SL869P-201ENST00000497032 300 ntBASIC7.57□□□□□ -1.2
VARSP26640 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.57□□□□□ -1.2
VARSP26640 RNU6-1170P-201ENST00000515974 106 ntBASIC7.57□□□□□ -1.2
VARSP26640 RN7SKP14-201ENST00000516000 329 ntBASIC7.57□□□□□ -1.2
VARSP26640 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC7.57□□□□□ -1.2
VARSP26640 ZNF705CP-201ENST00000530515 889 ntBASIC7.57□□□□□ -1.2
VARSP26640 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.57□□□□□ -1.2
VARSP26640 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.57□□□□□ -1.2
VARSP26640 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC7.57□□□□□ -1.2
VARSP26640 PDCD5P1-201ENST00000543528 309 ntBASIC7.57□□□□□ -1.2
VARSP26640 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC7.57□□□□□ -1.2
VARSP26640 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC7.57□□□□□ -1.2
VARSP26640 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.57□□□□□ -1.2
VARSP26640 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.57□□□□□ -1.2
VARSP26640 DPPA3P2-202ENST00000557188 1219 ntBASIC7.57□□□□□ -1.2
VARSP26640 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC7.57□□□□□ -1.2
VARSP26640 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.57□□□□□ -1.2
VARSP26640 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC7.57□□□□□ -1.2
VARSP26640 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.57□□□□□ -1.2
VARSP26640 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 SNRPGP17-201ENST00000603780 214 ntBASIC7.57□□□□□ -1.2
VARSP26640 SNX29P2-204ENST00000603801 875 ntBASIC7.57□□□□□ -1.2
VARSP26640 AC090948.1-201ENST00000607464 549 ntBASIC7.57□□□□□ -1.2
VARSP26640 AL137000.1-201ENST00000610528 1244 ntBASIC7.57□□□□□ -1.2
VARSP26640 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.57□□□□□ -1.2
VARSP26640 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
VARSP26640 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
VARSP26640 AC100810.6-201ENST00000638068 285 ntBASIC7.57□□□□□ -1.2
VARSP26640 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
VARSP26640 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 AC108467.2-201ENST00000617640 1597 ntBASIC7.57□□□□□ -1.2
VARSP26640 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.57□□□□□ -1.2
VARSP26640 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.57□□□□□ -1.2
VARSP26640 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.57□□□□□ -1.2
VARSP26640 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARSP26640 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms