Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SETP20-201ENST00000457046 852 ntBASIC5.62□□□□□ -1.51
KRT3P12035 RPSAP39-201ENST00000467439 883 ntBASIC5.62□□□□□ -1.51
KRT3P12035 RN7SL423P-201ENST00000486202 304 ntBASIC5.62□□□□□ -1.51
KRT3P12035 RPL7P51-201ENST00000490532 749 ntBASIC5.62□□□□□ -1.51
KRT3P12035 AC022133.1-201ENST00000490961 571 ntBASIC5.62□□□□□ -1.51
KRT3P12035 RPS12P31-201ENST00000491419 398 ntBASIC5.62□□□□□ -1.51
KRT3P12035 RPS24P16-201ENST00000497294 392 ntBASIC5.62□□□□□ -1.51
KRT3P12035 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.62□□□□□ -1.51
KRT3P12035 AC092709.1-201ENST00000521355 1045 ntBASIC5.62□□□□□ -1.51
KRT3P12035 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.62□□□□□ -1.51
KRT3P12035 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.62□□□□□ -1.51
KRT3P12035 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.62□□□□□ -1.51
KRT3P12035 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.62□□□□□ -1.51
KRT3P12035 HNRNPRP2-201ENST00000528421 743 ntBASIC5.62□□□□□ -1.51
KRT3P12035 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KRT3P12035 AC027216.1-201ENST00000577726 685 ntBASIC5.62□□□□□ -1.51
KRT3P12035 SNORD95-201ENST00000579879 68 ntBASIC5.62□□□□□ -1.51
KRT3P12035 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.62□□□□□ -1.51
KRT3P12035 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.62□□□□□ -1.51
KRT3P12035 AC006363.1-201ENST00000603806 463 ntBASIC5.62□□□□□ -1.51
KRT3P12035 AL713998.2-201ENST00000604538 1198 ntBASIC5.62□□□□□ -1.51
KRT3P12035 AC243960.7-201ENST00000623532 707 ntBASIC5.62□□□□□ -1.51
KRT3P12035 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRT3P12035 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRT3P12035 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
KRT3P12035 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRT3P12035 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
KRT3P12035 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
KRT3P12035 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
KRT3P12035 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
KRT3P12035 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.62□□□□□ -1.51
KRT3P12035 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
KRT3P12035 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
KRT3P12035 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.61□□□□□ -1.51
KRT3P12035 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
KRT3P12035 OR4K12P-201ENST00000406538 961 ntBASIC5.61□□□□□ -1.51
KRT3P12035 RNA5SP487-201ENST00000410186 122 ntBASIC5.61□□□□□ -1.51
KRT3P12035 AC079809.1-201ENST00000415468 276 ntBASIC5.61□□□□□ -1.51
KRT3P12035 MRRFP1-201ENST00000435941 1675 ntBASIC5.61□□□□□ -1.51
KRT3P12035 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT3P12035 CBX1P2-201ENST00000453841 458 ntBASIC5.61□□□□□ -1.51
KRT3P12035 RPL7P45-201ENST00000455851 743 ntBASIC5.61□□□□□ -1.51
KRT3P12035 RN7SL547P-201ENST00000490793 290 ntBASIC5.61□□□□□ -1.51
KRT3P12035 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.61□□□□□ -1.51
KRT3P12035 HMGB1P40-201ENST00000525121 540 ntBASIC5.61□□□□□ -1.51
KRT3P12035 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT3P12035 YWHABP2-201ENST00000540201 713 ntBASIC5.61□□□□□ -1.51
KRT3P12035 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT3P12035 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT3P12035 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
KRT3P12035 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 RBM22P1-201ENST00000578589 1214 ntBASIC5.61□□□□□ -1.51
KRT3P12035 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.61□□□□□ -1.51
KRT3P12035 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.61□□□□□ -1.51
KRT3P12035 AC009303.3-201ENST00000591103 736 ntBASIC5.61□□□□□ -1.51
KRT3P12035 SUGT1P3-202ENST00000604259 383 ntBASIC5.61□□□□□ -1.51
KRT3P12035 AC005252.1-201ENST00000604518 1063 ntBASIC5.61□□□□□ -1.51
KRT3P12035 GMCL1P2-201ENST00000605230 823 ntBASIC5.61□□□□□ -1.51
KRT3P12035 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 AL929601.4-201ENST00000613011 1341 ntBASIC5.61□□□□□ -1.51
KRT3P12035 AC004477.3-201ENST00000614061 590 ntBASIC5.61□□□□□ -1.51
KRT3P12035 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.61□□□□□ -1.51
KRT3P12035 AC093909.5-201ENST00000621839 1799 ntBASIC5.61□□□□□ -1.51
KRT3P12035 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.61□□□□□ -1.51
KRT3P12035 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
KRT3P12035 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRT3P12035 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRT3P12035 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.6□□□□□ -1.51
KRT3P12035 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRT3P12035 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRT3P12035 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRT3P12035 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
KRT3P12035 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRT3P12035 AL513548.1-201ENST00000562904 1724 ntBASIC5.6□□□□□ -1.51
KRT3P12035 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
KRT3P12035 OR9G4-201ENST00000302957 984 ntBASIC5.6□□□□□ -1.51
KRT3P12035 RNA5SP242-201ENST00000364171 118 ntBASIC5.6□□□□□ -1.51
KRT3P12035 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.6□□□□□ -1.51
KRT3P12035 AL513325.1-201ENST00000417716 1034 ntBASIC5.6□□□□□ -1.51
KRT3P12035 GNG5P5-201ENST00000420444 220 ntBASIC5.6□□□□□ -1.51
KRT3P12035 RFESDP1-201ENST00000422350 461 ntBASIC5.6□□□□□ -1.51
KRT3P12035 AL034379.1-201ENST00000423216 253 ntBASIC5.6□□□□□ -1.51
KRT3P12035 HMGN2P27-201ENST00000427352 270 ntBASIC5.6□□□□□ -1.51
KRT3P12035 HSPD1P12-201ENST00000429127 1069 ntBASIC5.6□□□□□ -1.51
KRT3P12035 AL136231.1-201ENST00000429407 730 ntBASIC5.6□□□□□ -1.51
KRT3P12035 AC090018.1-201ENST00000434369 367 ntBASIC5.6□□□□□ -1.51
KRT3P12035 RPL12P11-201ENST00000439970 501 ntBASIC5.6□□□□□ -1.51
KRT3P12035 AC007386.1-201ENST00000455212 582 ntBASIC5.6□□□□□ -1.51
KRT3P12035 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.6□□□□□ -1.51
KRT3P12035 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms