Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC016542.1-201ENST00000608259 493 ntBASIC5.97□□□□□ -1.45
MMP3P08254 AC024933.1-201ENST00000608472 348 ntBASIC5.97□□□□□ -1.45
MMP3P08254 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.97□□□□□ -1.45
MMP3P08254 AC099494.2-201ENST00000623371 978 ntBASIC5.97□□□□□ -1.45
MMP3P08254 AC135068.5-201ENST00000624197 983 ntBASIC5.97□□□□□ -1.45
MMP3P08254 AC073869.8-201ENST00000641806 335 ntBASIC5.97□□□□□ -1.45
MMP3P08254 AC239868.2-201ENST00000564237 4527 ntBASIC5.97□□□□□ -1.45
MMP3P08254 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MMP3P08254 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MMP3P08254 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.97□□□□□ -1.45
MMP3P08254 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.45
MMP3P08254 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
MMP3P08254 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.45
MMP3P08254 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
MMP3P08254 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.96□□□□□ -1.45
MMP3P08254 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
MMP3P08254 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.96□□□□□ -1.46
MMP3P08254 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 RNU1-146P-201ENST00000364015 165 ntBASIC5.96□□□□□ -1.46
MMP3P08254 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 SNORD56.6-201ENST00000384569 71 ntBASIC5.96□□□□□ -1.46
MMP3P08254 AL050305.1-201ENST00000399993 1230 ntBASIC5.96□□□□□ -1.46
MMP3P08254 HSPA8P15-201ENST00000401676 786 ntBASIC5.96□□□□□ -1.46
MMP3P08254 AL589994.1-201ENST00000404962 340 ntBASIC5.96□□□□□ -1.46
MMP3P08254 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
MMP3P08254 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.96□□□□□ -1.46
MMP3P08254 AL139128.1-201ENST00000413921 941 ntBASIC5.96□□□□□ -1.46
MMP3P08254 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.96□□□□□ -1.46
MMP3P08254 MTND2P9-201ENST00000422293 931 ntBASIC5.96□□□□□ -1.46
MMP3P08254 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.96□□□□□ -1.46
MMP3P08254 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.96□□□□□ -1.46
MMP3P08254 RPS15AP29-201ENST00000445539 400 ntBASIC5.96□□□□□ -1.46
MMP3P08254 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.96□□□□□ -1.46
MMP3P08254 DNAJB5P1-201ENST00000454004 806 ntBASIC5.96□□□□□ -1.46
MMP3P08254 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 AC058823.1-201ENST00000485315 474 ntBASIC5.96□□□□□ -1.46
MMP3P08254 RN7SL423P-201ENST00000486202 304 ntBASIC5.96□□□□□ -1.46
MMP3P08254 AC021106.1-201ENST00000509020 1058 ntBASIC5.96□□□□□ -1.46
MMP3P08254 RN7SKP147-201ENST00000517154 244 ntBASIC5.96□□□□□ -1.46
MMP3P08254 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.96□□□□□ -1.46
MMP3P08254 AC025423.2-201ENST00000537570 439 ntBASIC5.96□□□□□ -1.46
MMP3P08254 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.96□□□□□ -1.46
MMP3P08254 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.96□□□□□ -1.46
MMP3P08254 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.96□□□□□ -1.46
MMP3P08254 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.96□□□□□ -1.46
MMP3P08254 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.96□□□□□ -1.46
MMP3P08254 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.96□□□□□ -1.46
MMP3P08254 AL445528.2-201ENST00000620582 470 ntBASIC5.96□□□□□ -1.46
MMP3P08254 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.96□□□□□ -1.46
MMP3P08254 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.96□□□□□ -1.46
MMP3P08254 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.96□□□□□ -1.46
MMP3P08254 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.96□□□□□ -1.46
MMP3P08254 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.96□□□□□ -1.46
MMP3P08254 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.96□□□□□ -1.46
MMP3P08254 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
MMP3P08254 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
MMP3P08254 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MMP3P08254 PANDAR-201ENST00000629595 1506 ntBASIC5.95□□□□□ -1.46
MMP3P08254 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
MMP3P08254 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
MMP3P08254 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
MMP3P08254 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
MMP3P08254 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.95□□□□□ -1.46
MMP3P08254 Y_RNA.62-201ENST00000362840 99 ntBASIC5.95□□□□□ -1.46
MMP3P08254 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
MMP3P08254 RNU6-883P-201ENST00000384597 107 ntBASIC5.95□□□□□ -1.46
MMP3P08254 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.95□□□□□ -1.46
MMP3P08254 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.95□□□□□ -1.46
MMP3P08254 AL357078.2-201ENST00000416486 427 ntBASIC5.95□□□□□ -1.46
MMP3P08254 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
MMP3P08254 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.95□□□□□ -1.46
MMP3P08254 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.95□□□□□ -1.46
MMP3P08254 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.95□□□□□ -1.46
MMP3P08254 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.95□□□□□ -1.46
MMP3P08254 AC092647.2-201ENST00000452998 253 ntBASIC5.95□□□□□ -1.46
MMP3P08254 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.95□□□□□ -1.46
MMP3P08254 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.95□□□□□ -1.46
MMP3P08254 RN7SL860P-201ENST00000473738 223 ntBASIC5.95□□□□□ -1.46
MMP3P08254 RPL7P40-201ENST00000481703 745 ntBASIC5.95□□□□□ -1.46
MMP3P08254 DEFB109A-201ENST00000482450 265 ntBASIC5.95□□□□□ -1.46
MMP3P08254 AC112184.1-201ENST00000505179 312 ntBASIC5.95□□□□□ -1.46
MMP3P08254 ST13P12-201ENST00000508958 1094 ntBASIC5.95□□□□□ -1.46
MMP3P08254 AC004980.4-201ENST00000513375 203 ntBASIC5.95□□□□□ -1.46
MMP3P08254 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.95□□□□□ -1.46
MMP3P08254 HIGD1AP5-201ENST00000529959 259 ntBASIC5.95□□□□□ -1.46
MMP3P08254 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.95□□□□□ -1.46
MMP3P08254 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.95□□□□□ -1.46
MMP3P08254 AC012414.2-201ENST00000559474 187 ntBASIC5.95□□□□□ -1.46
MMP3P08254 AC009237.13-201ENST00000603193 276 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms