Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTSDP07339 AC083843.3-201ENST00000623679 2186 ntBASIC4.36□□□□□ -1.71
CTSDP07339 AC063976.2-201ENST00000425667 3556 ntBASIC4.35□□□□□ -1.71
CTSDP07339 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
CTSDP07339 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CTSDP07339 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.35□□□□□ -1.71
CTSDP07339 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CTSDP07339 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTSDP07339 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CTSDP07339 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.35□□□□□ -1.71
CTSDP07339 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.35□□□□□ -1.71
CTSDP07339 OR52B3P-201ENST00000314715 928 ntBASIC4.35□□□□□ -1.71
CTSDP07339 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.35□□□□□ -1.71
CTSDP07339 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.35□□□□□ -1.71
CTSDP07339 UBBP2-201ENST00000376781 231 ntBASIC4.35□□□□□ -1.71
CTSDP07339 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 AC013442.1-201ENST00000397347 228 ntBASIC4.35□□□□□ -1.71
CTSDP07339 AC013429.2-201ENST00000418798 781 ntBASIC4.35□□□□□ -1.71
CTSDP07339 RPS3P2-201ENST00000421346 701 ntBASIC4.35□□□□□ -1.71
CTSDP07339 IPPKP1-201ENST00000422501 768 ntBASIC4.35□□□□□ -1.71
CTSDP07339 AL133173.1-201ENST00000423458 397 ntBASIC4.35□□□□□ -1.71
CTSDP07339 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.35□□□□□ -1.71
CTSDP07339 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.35□□□□□ -1.71
CTSDP07339 GSTM5P1-201ENST00000434751 660 ntBASIC4.35□□□□□ -1.71
CTSDP07339 CLUHP1-201ENST00000435012 1190 ntBASIC4.35□□□□□ -1.71
CTSDP07339 GAPDHP25-201ENST00000447061 1001 ntBASIC4.35□□□□□ -1.71
CTSDP07339 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 AC011476.1-201ENST00000466725 307 ntBASIC4.35□□□□□ -1.71
CTSDP07339 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.35□□□□□ -1.71
CTSDP07339 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.35□□□□□ -1.71
CTSDP07339 AC006427.1-201ENST00000514359 712 ntBASIC4.35□□□□□ -1.71
CTSDP07339 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.35□□□□□ -1.71
CTSDP07339 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.35□□□□□ -1.71
CTSDP07339 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.35□□□□□ -1.71
CTSDP07339 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.35□□□□□ -1.71
CTSDP07339 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.35□□□□□ -1.71
CTSDP07339 AL118522.2-201ENST00000616045 615 ntBASIC4.35□□□□□ -1.71
CTSDP07339 AC022106.2-201ENST00000620114 757 ntBASIC4.35□□□□□ -1.71
CTSDP07339 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.35□□□□□ -1.71
CTSDP07339 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 MTCO1P46-201ENST00000451639 1491 ntBASIC4.35□□□□□ -1.71
CTSDP07339 MAPK10-349ENST00000641767 3661 ntBASIC4.35□□□□□ -1.71
CTSDP07339 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTSDP07339 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTSDP07339 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTSDP07339 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.34□□□□□ -1.71
CTSDP07339 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTSDP07339 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
CTSDP07339 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTSDP07339 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.34□□□□□ -1.71
CTSDP07339 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTSDP07339 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTSDP07339 MIR375-201ENST00000362103 64 ntBASIC4.34□□□□□ -1.71
CTSDP07339 RNU4-2-201ENST00000365668 141 ntBASIC4.34□□□□□ -1.71
CTSDP07339 RNU1-74P-201ENST00000384108 171 ntBASIC4.34□□□□□ -1.71
CTSDP07339 HSPA8P15-201ENST00000401676 786 ntBASIC4.34□□□□□ -1.71
CTSDP07339 HMGB1P20-201ENST00000402555 677 ntBASIC4.34□□□□□ -1.71
CTSDP07339 LYPLA1P3-201ENST00000402650 695 ntBASIC4.34□□□□□ -1.71
CTSDP07339 AL035079.1-201ENST00000405210 287 ntBASIC4.34□□□□□ -1.71
CTSDP07339 AL390316.1-201ENST00000406279 553 ntBASIC4.34□□□□□ -1.71
CTSDP07339 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.34□□□□□ -1.71
CTSDP07339 SLC20A1P1-201ENST00000413906 956 ntBASIC4.34□□□□□ -1.71
CTSDP07339 RPL36AP10-201ENST00000421785 322 ntBASIC4.34□□□□□ -1.71
CTSDP07339 SRSF1P1-201ENST00000424058 520 ntBASIC4.34□□□□□ -1.71
CTSDP07339 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTSDP07339 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.34□□□□□ -1.71
CTSDP07339 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.34□□□□□ -1.71
CTSDP07339 AC108161.1-201ENST00000461060 402 ntBASIC4.34□□□□□ -1.71
CTSDP07339 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.34□□□□□ -1.71
CTSDP07339 AP000942.1-201ENST00000463969 747 ntBASIC4.34□□□□□ -1.71
CTSDP07339 RN7SL447P-201ENST00000494711 245 ntBASIC4.34□□□□□ -1.71
CTSDP07339 AC093890.1-201ENST00000502554 540 ntBASIC4.34□□□□□ -1.71
CTSDP07339 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTSDP07339 RFPL4AP5-201ENST00000514977 504 ntBASIC4.34□□□□□ -1.71
CTSDP07339 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.34□□□□□ -1.71
CTSDP07339 IGKV2-4-201ENST00000523070 340 ntBASIC4.34□□□□□ -1.71
CTSDP07339 NANOGNBP2-201ENST00000544753 553 ntBASIC4.34□□□□□ -1.71
CTSDP07339 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.34□□□□□ -1.71
CTSDP07339 AC079600.1-201ENST00000550326 297 ntBASIC4.34□□□□□ -1.71
CTSDP07339 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.34□□□□□ -1.71
CTSDP07339 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.34□□□□□ -1.71
CTSDP07339 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.34□□□□□ -1.71
CTSDP07339 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.34□□□□□ -1.71
CTSDP07339 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.34□□□□□ -1.71
CTSDP07339 MIR1910-201ENST00000636955 80 ntBASIC4.34□□□□□ -1.71
CTSDP07339 TMEM30CP-203ENST00000637814 1035 ntBASIC4.34□□□□□ -1.71
CTSDP07339 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTSDP07339 BTBD10P1-201ENST00000549824 1352 ntBASIC4.34□□□□□ -1.71
CTSDP07339 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTSDP07339 AC106872.5-201ENST00000508856 1416 ntBASIC4.34□□□□□ -1.71
CTSDP07339 AC114786.1-201ENST00000512892 1415 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms