Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC015712.7-201ENST00000615211 635 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 uc_338.7-201ENST00000621834 124 ntBASIC6.73□□□□□ -1.33
COL5A2P05997 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
COL5A2P05997 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.72□□□□□ -1.33
COL5A2P05997 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL5A2P05997 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL5A2P05997 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
COL5A2P05997 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.72□□□□□ -1.33
COL5A2P05997 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL5A2P05997 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL5A2P05997 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL5A2P05997 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL5A2P05997 MAPK10-270ENST00000641102 3538 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.72□□□□□ -1.33
COL5A2P05997 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
COL5A2P05997 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
COL5A2P05997 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL5A2P05997 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL5A2P05997 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.72□□□□□ -1.33
COL5A2P05997 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL5A2P05997 OR9G4-201ENST00000302957 984 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 AL021331.1-201ENST00000402817 582 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 ELOCP19-201ENST00000411919 318 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 RSU1P3-201ENST00000412878 835 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 RPS29P9-201ENST00000440360 171 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.72□□□□□ -1.33
COL5A2P05997 snoU13.1-201ENST00000459157 104 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.72□□□□□ -1.33
COL5A2P05997 IGKV2D-10-201ENST00000520194 281 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 OR5M2P-201ENST00000529003 936 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.72□□□□□ -1.33
COL5A2P05997 PARP1P2-201ENST00000556806 195 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.72□□□□□ -1.33
COL5A2P05997 BNIP3P35-201ENST00000604530 490 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 AP001521.2-201ENST00000608772 546 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 AL359757.1-201ENST00000623176 255 ntBASIC6.72□□□□□ -1.33
COL5A2P05997 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL5A2P05997 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL5A2P05997 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL5A2P05997 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
COL5A2P05997 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL5A2P05997 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.71□□□□□ -1.33
COL5A2P05997 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL5A2P05997 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.71□□□□□ -1.34
COL5A2P05997 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.71□□□□□ -1.34
COL5A2P05997 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
COL5A2P05997 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
COL5A2P05997 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL5A2P05997 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.71□□□□□ -1.34
COL5A2P05997 OR52A4P-201ENST00000472867 958 ntBASIC6.71□□□□□ -1.34
COL5A2P05997 RPS24P16-201ENST00000497294 392 ntBASIC6.71□□□□□ -1.34
COL5A2P05997 HMGN1P9-201ENST00000515212 298 ntBASIC6.71□□□□□ -1.34
COL5A2P05997 RN7SKP21-201ENST00000516503 220 ntBASIC6.71□□□□□ -1.34
COL5A2P05997 AC134698.5-201ENST00000519444 336 ntBASIC6.71□□□□□ -1.34
COL5A2P05997 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.71□□□□□ -1.34
COL5A2P05997 SOX5P1-201ENST00000524155 1127 ntBASIC6.71□□□□□ -1.34
COL5A2P05997 GTF2IP11-201ENST00000526931 420 ntBASIC6.71□□□□□ -1.34
COL5A2P05997 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.71□□□□□ -1.34
COL5A2P05997 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.71□□□□□ -1.34
COL5A2P05997 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.71□□□□□ -1.34
COL5A2P05997 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.71□□□□□ -1.34
COL5A2P05997 OR52H1-202ENST00000641796 1061 ntBASIC6.71□□□□□ -1.34
COL5A2P05997 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.71□□□□□ -1.34
COL5A2P05997 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL5A2P05997 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL5A2P05997 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL5A2P05997 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL5A2P05997 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.71□□□□□ -1.34
COL5A2P05997 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL5A2P05997 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
COL5A2P05997 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL5A2P05997 AL033543.1-201ENST00000623440 13454 ntBASIC6.7□□□□□ -1.34
COL5A2P05997 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.7□□□□□ -1.34
COL5A2P05997 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL5A2P05997 AC099654.2-201ENST00000433031 1980 ntBASIC6.7□□□□□ -1.34
COL5A2P05997 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COL5A2P05997 KARSP3-201ENST00000571212 1504 ntBASIC6.7□□□□□ -1.34
COL5A2P05997 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.7□□□□□ -1.34
COL5A2P05997 U3.10-201ENST00000364459 214 ntBASIC6.7□□□□□ -1.34
COL5A2P05997 SNORA70F-201ENST00000384142 135 ntBASIC6.7□□□□□ -1.34
COL5A2P05997 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.7□□□□□ -1.34
COL5A2P05997 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.7□□□□□ -1.34
COL5A2P05997 OR1H1P-201ENST00000448731 937 ntBASIC6.7□□□□□ -1.34
COL5A2P05997 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.7□□□□□ -1.34
COL5A2P05997 AC010733.1-201ENST00000451515 401 ntBASIC6.7□□□□□ -1.34
COL5A2P05997 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.7□□□□□ -1.34
COL5A2P05997 RPL10P17-201ENST00000453852 316 ntBASIC6.7□□□□□ -1.34
COL5A2P05997 RN7SL189P-201ENST00000468631 289 ntBASIC6.7□□□□□ -1.34
COL5A2P05997 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
COL5A2P05997 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.7□□□□□ -1.34
COL5A2P05997 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
COL5A2P05997 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.7□□□□□ -1.34
COL5A2P05997 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.7□□□□□ -1.34
COL5A2P05997 MIR4715-201ENST00000584117 79 ntBASIC6.7□□□□□ -1.34
COL5A2P05997 AL590392.1-201ENST00000604960 446 ntBASIC6.7□□□□□ -1.34
COL5A2P05997 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.7□□□□□ -1.34
COL5A2P05997 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.7□□□□□ -1.34
COL5A2P05997 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.7□□□□□ -1.34
COL5A2P05997 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.7□□□□□ -1.34
COL5A2P05997 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms