Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.12□□□□□ -1.59
CLDN9O95484 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN9O95484 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.12□□□□□ -1.59
CLDN9O95484 CASC19-248ENST00000641674 1356 ntBASIC5.12□□□□□ -1.59
CLDN9O95484 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CLDN9O95484 MTCO1P7-201ENST00000419523 1542 ntBASIC5.12□□□□□ -1.59
CLDN9O95484 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN9O95484 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN9O95484 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLDN9O95484 MAPK10-338ENST00000641647 3362 ntBASIC5.12□□□□□ -1.59
CLDN9O95484 KARSP1-201ENST00000451871 1752 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CLDN9O95484 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN9O95484 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN9O95484 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN9O95484 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN9O95484 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN9O95484 MAPK10-328ENST00000641553 4009 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CLDN9O95484 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN9O95484 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN9O95484 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN9O95484 NAMPTP1-201ENST00000440465 2514 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 OR9K1P-201ENST00000326513 941 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 RNA5SP335-201ENST00000363817 110 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN9O95484 MIR589-201ENST00000385238 99 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 AL391422.1-201ENST00000402155 436 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 OR4K12P-201ENST00000406538 961 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN9O95484 AL034379.1-201ENST00000423216 253 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLDN9O95484 AC104843.2-201ENST00000427666 297 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 BX119904.3-201ENST00000428194 957 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 NFYAP1-201ENST00000431953 972 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN9O95484 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.11□□□□□ -1.59
CLDN9O95484 AC012075.1-201ENST00000436549 580 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 RPL12P18-201ENST00000437175 325 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 GAPDHP58-201ENST00000438477 1006 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.11□□□□□ -1.59
CLDN9O95484 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN9O95484 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CLDN9O95484 RPL35AP19-201ENST00000469425 329 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 AC016687.1-201ENST00000482574 353 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 PPIAP19-201ENST00000486414 492 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 RN7SL447P-201ENST00000494711 245 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN9O95484 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.11□□□□□ -1.59
CLDN9O95484 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN9O95484 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN9O95484 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
CLDN9O95484 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CLDN9O95484 RBM22P1-201ENST00000578589 1214 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.11□□□□□ -1.59
CLDN9O95484 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN9O95484 AC010503.3-201ENST00000594355 540 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN9O95484 AC104695.2-201ENST00000605056 775 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 MIR8080-201ENST00000622224 89 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN9O95484 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CLDN9O95484 AC074101.1-201ENST00000637861 241 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.11□□□□□ -1.59
CLDN9O95484 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN9O95484 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CLDN9O95484 TRIM51GP-201ENST00000534741 1350 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLDN9O95484 MRRFP1-201ENST00000435941 1675 ntBASIC5.11□□□□□ -1.59
CLDN9O95484 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CLDN9O95484 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CLDN9O95484 SMG1P7-201ENST00000565246 2704 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN9O95484 AL450345.1-202ENST00000605741 3881 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN9O95484 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN9O95484 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN9O95484 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN9O95484 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN9O95484 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN9O95484 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN9O95484 MIR105-1-201ENST00000385222 81 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 RPL21P67-201ENST00000402896 478 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 AL358178.1-201ENST00000407698 397 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 AL445213.1-201ENST00000412589 747 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 CDY17P-201ENST00000414121 1282 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CLDN9O95484 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN9O95484 AL161722.2-201ENST00000434731 981 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 CLUHP1-201ENST00000435012 1190 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 AP000281.1-201ENST00000444036 316 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN9O95484 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN9O95484 AC104634.1-201ENST00000452720 462 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN9O95484 RN7SL189P-201ENST00000468631 289 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 RN7SL214P-201ENST00000487317 265 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 RN7SL466P-201ENST00000497546 295 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 MYL12BP2-201ENST00000503948 512 ntBASIC5.1□□□□□ -1.59
CLDN9O95484 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms