Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE4BO95155 MTND4LP21-201ENST00000415303 295 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.81□□□□□ -1.48
UBE4BO95155 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.81□□□□□ -1.48
UBE4BO95155 BX119904.3-201ENST00000428194 957 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.81□□□□□ -1.48
UBE4BO95155 FAM96AP1-201ENST00000430879 482 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 MTND6P5-201ENST00000448266 512 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE4BO95155 OR52E3P-201ENST00000452083 936 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 AC008638.1-201ENST00000506035 866 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.81□□□□□ -1.48
UBE4BO95155 ATP5LP3-201ENST00000514223 304 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 EIF3KP3-201ENST00000514461 639 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 RNU6-941P-201ENST00000516346 108 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 RNA5SP373-201ENST00000517271 95 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE4BO95155 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE4BO95155 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
UBE4BO95155 AC027369.5-201ENST00000533838 755 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE4BO95155 MTND2P17-201ENST00000550281 688 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE4BO95155 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.81□□□□□ -1.48
UBE4BO95155 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.81□□□□□ -1.48
UBE4BO95155 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.81□□□□□ -1.48
UBE4BO95155 AL162431.4-201ENST00000604674 411 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 AC096586.2-201ENST00000610260 441 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 AP003400.2-201ENST00000624036 666 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.81□□□□□ -1.48
UBE4BO95155 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.81□□□□□ -1.48
UBE4BO95155 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
UBE4BO95155 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
UBE4BO95155 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
UBE4BO95155 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
UBE4BO95155 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.81□□□□□ -1.48
UBE4BO95155 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBE4BO95155 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBE4BO95155 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE4BO95155 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.81□□□□□ -1.48
UBE4BO95155 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBE4BO95155 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE4BO95155 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
UBE4BO95155 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
UBE4BO95155 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
UBE4BO95155 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
UBE4BO95155 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBE4BO95155 AC092747.4-201ENST00000620519 1861 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE4BO95155 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBE4BO95155 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE4BO95155 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 U3.7-201ENST00000363668 216 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
UBE4BO95155 AL589994.1-201ENST00000404962 340 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 HYALP1-201ENST00000417674 1279 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 AC108075.1-201ENST00000424692 529 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 AC093655.2-201ENST00000425735 631 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 TRGV7-201ENST00000427089 353 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 GAPDHP58-201ENST00000438477 1006 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 AC011225.1-201ENST00000457751 369 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
UBE4BO95155 BX510359.5-201ENST00000515651 304 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 RNU4-18P-201ENST00000516751 149 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.8□□□□□ -1.48
UBE4BO95155 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.8□□□□□ -1.48
UBE4BO95155 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 AC040958.1-201ENST00000561102 201 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 IMMP1LP3-201ENST00000604197 224 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 AC011626.1-201ENST00000604710 562 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 AC090527.3-201ENST00000619041 548 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 MIR6837-201ENST00000620884 64 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.8□□□□□ -1.48
UBE4BO95155 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBE4BO95155 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.8□□□□□ -1.48
UBE4BO95155 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE4BO95155 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
UBE4BO95155 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
UBE4BO95155 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE4BO95155 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBE4BO95155 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
UBE4BO95155 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.8□□□□□ -1.48
UBE4BO95155 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
UBE4BO95155 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
UBE4BO95155 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
UBE4BO95155 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
UBE4BO95155 AC233968.1-201ENST00000611212 1300 ntBASIC5.8□□□□□ -1.48
UBE4BO95155 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms