Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 NENFP1-201ENST00000419476 466 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS4BO75351 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS4BO75351 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS4BO75351 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS4BO75351 Z73417.1-201ENST00000447373 778 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS4BO75351 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS4BO75351 MYO5BP2-201ENST00000449815 1277 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.9□□□□□ -1.46
VPS4BO75351 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS4BO75351 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS4BO75351 AC026414.1-201ENST00000504046 698 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS4BO75351 AC025458.1-201ENST00000506046 166 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 AC138409.2-202ENST00000507274 458 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS4BO75351 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS4BO75351 AC006499.4-201ENST00000510947 694 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 TOMM22P4-201ENST00000511318 336 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS4BO75351 RNU6-311P-201ENST00000516224 102 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS4BO75351 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS4BO75351 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS4BO75351 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS4BO75351 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS4BO75351 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS4BO75351 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS4BO75351 RNU4ATAC-201ENST00000580972 127 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.9□□□□□ -1.46
VPS4BO75351 VN1R87P-201ENST00000596706 487 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 NIFKP6-201ENST00000598115 845 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 AC009948.4-201ENST00000604692 675 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.9□□□□□ -1.46
VPS4BO75351 AC245100.7-201ENST00000609678 442 ntBASIC5.9□□□□□ -1.46
VPS4BO75351 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS4BO75351 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS4BO75351 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VPS4BO75351 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VPS4BO75351 GTF2IP4-201ENST00000453092 2054 ntBASIC5.9□□□□□ -1.47
VPS4BO75351 AC027279.4-201ENST00000624371 2072 ntBASIC5.9□□□□□ -1.47
VPS4BO75351 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
VPS4BO75351 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.9□□□□□ -1.47
VPS4BO75351 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS4BO75351 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
VPS4BO75351 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS4BO75351 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.9□□□□□ -1.47
VPS4BO75351 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS4BO75351 MFSD8-220ENST00000641243 1422 ntBASIC5.9□□□□□ -1.47
VPS4BO75351 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS4BO75351 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS4BO75351 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS4BO75351 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS4BO75351 AC025470.1-201ENST00000510053 2032 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS4BO75351 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS4BO75351 AC011416.1-201ENST00000514947 1732 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 AC027575.3-201ENST00000583058 2747 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS4BO75351 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VPS4BO75351 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS4BO75351 TMSB4XP4-201ENST00000323496 618 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
VPS4BO75351 AP002530.1-201ENST00000405705 684 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 RPL26P37-201ENST00000411983 438 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS4BO75351 AC008173.1-201ENST00000418901 264 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 RPS26P13-201ENST00000419030 330 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS4BO75351 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS4BO75351 DEFB130D-201ENST00000426866 237 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
VPS4BO75351 AC112492.2-201ENST00000432774 1030 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 ATP5LP2-201ENST00000440646 311 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 OR10R1P-201ENST00000441524 1141 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 AC007998.1-201ENST00000474156 672 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 AC116562.1-201ENST00000485355 781 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.89□□□□□ -1.47
VPS4BO75351 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.89□□□□□ -1.47
VPS4BO75351 AC147055.3-201ENST00000510547 851 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 PRMT5P1-201ENST00000514351 598 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 Y_RNA.710-201ENST00000516975 110 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 AC060775.1-201ENST00000518241 520 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS4BO75351 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS4BO75351 MRPS36P5-201ENST00000551909 298 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 MRPS21P8-201ENST00000569196 235 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.89□□□□□ -1.47
VPS4BO75351 AC006115.2-201ENST00000596823 202 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 AC008536.1-201ENST00000602872 669 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS4BO75351 AL591167.1-201ENST00000607321 456 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
VPS4BO75351 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS4BO75351 AC022079.1-201ENST00000621546 602 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.89□□□□□ -1.47
VPS4BO75351 AP002791.1-201ENST00000623291 381 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms