Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 BX510359.3-201ENST00000422168 306 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 Z80107.1-201ENST00000436830 412 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.61□□□□□ -1.51
SMAD6O43541 AC074367.1-201ENST00000438685 1125 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.61□□□□□ -1.51
SMAD6O43541 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.61□□□□□ -1.51
SMAD6O43541 SPRYD7P1-201ENST00000443861 570 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 AC092106.1-201ENST00000444291 373 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.61□□□□□ -1.51
SMAD6O43541 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.61□□□□□ -1.51
SMAD6O43541 Z83820.1-201ENST00000456978 1499 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 AC011225.1-201ENST00000457751 369 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SMAD6O43541 RN7SL51P-201ENST00000468230 285 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.61□□□□□ -1.51
SMAD6O43541 RN7SKP99-201ENST00000517028 307 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.61□□□□□ -1.51
SMAD6O43541 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.61□□□□□ -1.51
SMAD6O43541 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SMAD6O43541 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.61□□□□□ -1.51
SMAD6O43541 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.61□□□□□ -1.51
SMAD6O43541 AC090022.1-201ENST00000546569 311 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 AL358913.1-201ENST00000554342 121 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SMAD6O43541 AC093849.1-201ENST00000563631 2209 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 AC009962.1-201ENST00000567327 3813 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.61□□□□□ -1.51
SMAD6O43541 FKBP1AP1-201ENST00000594588 318 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 AL158152.1-201ENST00000602652 1435 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 AC015802.5-201ENST00000607478 399 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 AC097504.2-201ENST00000608088 454 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 AC018645.2-201ENST00000609151 472 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 MIR6826-201ENST00000617808 98 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 AC138907.10-201ENST00000623708 983 ntBASIC5.61□□□□□ -1.51
SMAD6O43541 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.61□□□□□ -1.51
SMAD6O43541 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.61□□□□□ -1.51
SMAD6O43541 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.61□□□□□ -1.51
SMAD6O43541 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SMAD6O43541 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.61□□□□□ -1.51
SMAD6O43541 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SMAD6O43541 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMAD6O43541 AC027279.1-201ENST00000568885 4284 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SMAD6O43541 AC245100.2-201ENST00000454544 1679 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMAD6O43541 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.6□□□□□ -1.51
SMAD6O43541 AC233968.1-201ENST00000611212 1300 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMAD6O43541 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SMAD6O43541 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMAD6O43541 RNU1-77P-201ENST00000390868 162 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMAD6O43541 AC009804.1-201ENST00000400949 179 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.6□□□□□ -1.51
SMAD6O43541 PTP4A1P1-201ENST00000420539 515 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 FAR1P1-201ENST00000427163 934 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 BX119904.3-201ENST00000428194 957 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.6□□□□□ -1.51
SMAD6O43541 NPM1P48-201ENST00000436002 853 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 CYCSP12-201ENST00000437729 300 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 RN7SL177P-201ENST00000476596 299 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.6□□□□□ -1.51
SMAD6O43541 RPS17P5-201ENST00000498293 408 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 AC093801.2-201ENST00000503966 1050 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.6□□□□□ -1.51
SMAD6O43541 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.6□□□□□ -1.51
SMAD6O43541 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.6□□□□□ -1.51
SMAD6O43541 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.6□□□□□ -1.51
SMAD6O43541 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.6□□□□□ -1.51
SMAD6O43541 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMAD6O43541 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.6□□□□□ -1.51
SMAD6O43541 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMAD6O43541 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.6□□□□□ -1.51
SMAD6O43541 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMAD6O43541 AP005403.1-201ENST00000579720 229 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.6□□□□□ -1.51
SMAD6O43541 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.6□□□□□ -1.51
SMAD6O43541 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SMAD6O43541 AC068057.2-201ENST00000624047 895 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 AP003485.1-201ENST00000625093 753 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 AC136428.4-201ENST00000634254 1155 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.6□□□□□ -1.51
SMAD6O43541 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.6□□□□□ -1.51
SMAD6O43541 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMAD6O43541 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
SMAD6O43541 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SMAD6O43541 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMAD6O43541 OR4F13P-202ENST00000560066 2054 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 MIPEPP2-201ENST00000422560 1819 ntBASIC5.6□□□□□ -1.51
SMAD6O43541 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.6□□□□□ -1.51
SMAD6O43541 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.6□□□□□ -1.51
SMAD6O43541 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms