Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.13□□□□□ -1.43
FOXN3O00409 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
FOXN3O00409 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.13□□□□□ -1.43
FOXN3O00409 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.13□□□□□ -1.43
FOXN3O00409 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.13□□□□□ -1.43
FOXN3O00409 CD24P2-201ENST00000565486 219 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.13□□□□□ -1.43
FOXN3O00409 AL121652.1-201ENST00000608851 448 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.13□□□□□ -1.43
FOXN3O00409 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.13□□□□□ -1.43
FOXN3O00409 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.13□□□□□ -1.43
FOXN3O00409 AC079776.5-201ENST00000641920 211 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
FOXN3O00409 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
FOXN3O00409 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
FOXN3O00409 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
FOXN3O00409 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.13□□□□□ -1.43
FOXN3O00409 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
FOXN3O00409 AC114774.1-201ENST00000507410 1770 ntBASIC6.13□□□□□ -1.43
FOXN3O00409 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.13□□□□□ -1.43
FOXN3O00409 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
FOXN3O00409 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXN3O00409 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
FOXN3O00409 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
FOXN3O00409 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
FOXN3O00409 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.12□□□□□ -1.43
FOXN3O00409 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
FOXN3O00409 RNA5SP433-201ENST00000364491 114 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 RN7SKP275-201ENST00000364626 301 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 RNU6-244P-201ENST00000391028 104 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXN3O00409 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
FOXN3O00409 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.12□□□□□ -1.43
FOXN3O00409 TTC39DP-201ENST00000416781 1688 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXN3O00409 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXN3O00409 SFR1P2-201ENST00000421841 730 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 AL035660.1-201ENST00000422041 222 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 MTCO1P43-201ENST00000431831 488 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXN3O00409 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.12□□□□□ -1.43
FOXN3O00409 RPS27P5-201ENST00000444247 244 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
FOXN3O00409 AC008379.1-201ENST00000463655 464 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 CYCSP20-201ENST00000473154 315 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 RN7SL570P-201ENST00000484405 292 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 OR7E157P-201ENST00000494376 911 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXN3O00409 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.12□□□□□ -1.43
FOXN3O00409 AC093815.1-201ENST00000508637 280 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 AC025470.1-201ENST00000510053 2032 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXN3O00409 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.12□□□□□ -1.43
FOXN3O00409 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.12□□□□□ -1.43
FOXN3O00409 RN7SKP141-201ENST00000516167 338 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 IGHV3-63-201ENST00000518422 341 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.12□□□□□ -1.43
FOXN3O00409 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXN3O00409 CIR1P1-201ENST00000524055 1133 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 TRIM77BP-201ENST00000524985 1119 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.12□□□□□ -1.43
FOXN3O00409 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.12□□□□□ -1.43
FOXN3O00409 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
FOXN3O00409 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
FOXN3O00409 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
FOXN3O00409 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
FOXN3O00409 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXN3O00409 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.12□□□□□ -1.43
FOXN3O00409 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXN3O00409 AGGF1P7-201ENST00000562369 913 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
FOXN3O00409 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXN3O00409 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.12□□□□□ -1.43
FOXN3O00409 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.12□□□□□ -1.43
FOXN3O00409 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
FOXN3O00409 AC090666.1-201ENST00000578241 445 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 MIR4260-201ENST00000583107 67 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 EIF1P5-201ENST00000585002 234 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 AC245884.10-201ENST00000597355 337 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 AC034229.4-201ENST00000607861 441 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 AL135786.2-201ENST00000608422 615 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 AC008759.3-201ENST00000613300 508 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
FOXN3O00409 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
FOXN3O00409 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
FOXN3O00409 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
FOXN3O00409 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
FOXN3O00409 AL355488.2-201ENST00000609909 2850 ntBASIC6.12□□□□□ -1.43
FOXN3O00409 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXN3O00409 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXN3O00409 MTND5P11-201ENST00000511037 1812 ntBASIC6.11□□□□□ -1.43
FOXN3O00409 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXN3O00409 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXN3O00409 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXN3O00409 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
FOXN3O00409 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXN3O00409 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXN3O00409 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms