Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC188H7C350 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC188H7C350 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC188H7C350 RNU1-65P-201ENST00000363919 148 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 RPL10P10-201ENST00000403509 664 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 RNU2-22P-201ENST00000411266 212 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 NPM1P40-201ENST00000412758 733 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC188H7C350 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC188H7C350 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC188H7C350 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC188H7C350 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC188H7C350 AC002069.1-201ENST00000429649 1159 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC188H7C350 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC188H7C350 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC188H7C350 RBMY2TP-201ENST00000451162 947 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 BX842559.2-201ENST00000451418 605 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 AC025458.1-201ENST00000506046 166 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 RN7SKP183-201ENST00000517169 324 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC188H7C350 AC104997.1-201ENST00000519761 717 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 AC024405.1-201ENST00000532521 1042 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCDC188H7C350 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC188H7C350 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC188H7C350 AL845552.1-201ENST00000556820 323 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 AC016839.1-201ENST00000578162 867 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC188H7C350 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC188H7C350 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC188H7C350 BX005214.3-202ENST00000619809 325 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 AC024884.1-201ENST00000620583 399 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 AC129778.1-202ENST00000623812 261 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC188H7C350 AL591379.1-207ENST00000635982 261 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC188H7C350 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CCDC188H7C350 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC188H7C350 AL731532.2-201ENST00000623542 1953 ntBASIC5.56□□□□□ -1.52
CCDC188H7C350 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC188H7C350 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.55□□□□□ -1.52
CCDC188H7C350 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC188H7C350 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC188H7C350 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC188H7C350 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC188H7C350 AC006210.2-201ENST00000367074 1545 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 AC000374.1-201ENST00000434698 1745 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC188H7C350 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC188H7C350 AC010132.2-201ENST00000295493 1043 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC188H7C350 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC188H7C350 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC188H7C350 MIR589-201ENST00000385238 99 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 AL136116.2-201ENST00000404020 785 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 REREP1Y-201ENST00000422655 198 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 MTND6P12-201ENST00000428247 522 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC188H7C350 REREP2Y-201ENST00000439103 200 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC188H7C350 AL606490.8-201ENST00000441624 319 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 AL450996.1-201ENST00000445574 1202 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 NOP56P2-201ENST00000447491 769 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 AC093166.3-201ENST00000448785 303 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC188H7C350 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC188H7C350 MTND3P4-201ENST00000453537 303 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC188H7C350 AC079168.1-201ENST00000458741 345 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC188H7C350 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC188H7C350 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.55□□□□□ -1.52
CCDC188H7C350 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC188H7C350 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC188H7C350 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC188H7C350 AC107958.1-201ENST00000556576 290 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC188H7C350 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC188H7C350 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.55□□□□□ -1.52
CCDC188H7C350 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC188H7C350 AC002310.3-201ENST00000569728 723 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC188H7C350 AC012616.1-201ENST00000600294 197 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 HMGB1P51-201ENST00000605166 638 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 AL592494.3-201ENST00000609485 464 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 AC020763.5-201ENST00000623298 430 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 AP001052.1-201ENST00000626421 99 ntBASIC5.55□□□□□ -1.52
CCDC188H7C350 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.55□□□□□ -1.52
CCDC188H7C350 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC188H7C350 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CCDC188H7C350 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CCDC188H7C350 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC188H7C350 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC188H7C350 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CCDC188H7C350 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC188H7C350 AL603750.1-201ENST00000624216 1717 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC188H7C350 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms