Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TMEM88BA6NKF7 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
TMEM88BA6NKF7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.72□□□□□ -1.17
TMEM88BA6NKF7 AC109315.1-201ENST00000584143 1347 ntBASIC7.72□□□□□ -1.17
TMEM88BA6NKF7 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
TMEM88BA6NKF7 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
TMEM88BA6NKF7 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC7.72□□□□□ -1.17
TMEM88BA6NKF7 AL023806.3-201ENST00000638502 2704 ntBASIC7.72□□□□□ -1.17
TMEM88BA6NKF7 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.72□□□□□ -1.17
TMEM88BA6NKF7 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.71□□□□□ -1.17
TMEM88BA6NKF7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.71□□□□□ -1.17
TMEM88BA6NKF7 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.71□□□□□ -1.17
TMEM88BA6NKF7 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
TMEM88BA6NKF7 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.71□□□□□ -1.17
TMEM88BA6NKF7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TMEM88BA6NKF7 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.17
TMEM88BA6NKF7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 Y_RNA.6-201ENST00000362350 114 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 RNA5SP514-201ENST00000363717 111 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AL136131.1-201ENST00000406079 803 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 MIR1303-201ENST00000408625 86 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 RPL7P8-201ENST00000411964 730 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AL355433.1-201ENST00000422804 300 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 RPL5P6-201ENST00000425640 886 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 BLOC1S2P1-201ENST00000428431 301 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 RPL31P54-201ENST00000429803 370 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 SALL1P1-201ENST00000438101 3837 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC016908.1-201ENST00000442571 1219 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AL133351.3-201ENST00000454998 193 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 UBFD1P1-201ENST00000473259 814 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 ACTG1P13-201ENST00000486987 1043 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 SETP14-201ENST00000497538 873 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC090071.1-201ENST00000507713 644 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 CBX3P3-201ENST00000508108 532 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 RNA5SP362-201ENST00000516048 118 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 Y_RNA.667-201ENST00000516212 107 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC134698.4-201ENST00000523451 826 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 NOP10-202ENST00000557912 436 ntTSL 2 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC023827.2-201ENST00000566880 1061 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AP003115.1-201ENST00000569849 463 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC233702.7-202ENST00000582941 211 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC107982.3-201ENST00000584957 985 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 SNORA74.4-201ENST00000607595 199 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC026951.2-201ENST00000613847 241 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 DDX18P4-201ENST00000511690 1966 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 AC096656.1-201ENST00000623826 1364 ntBASIC7.71□□□□□ -1.18
TMEM88BA6NKF7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 RN7SKP296-201ENST00000411185 341 ntBASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 FCF1P9-201ENST00000412546 282 ntBASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 AC007899.1-201ENST00000412776 775 ntBASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 AC245060.4-201ENST00000413293 1121 ntBASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 SDHDP6-201ENST00000414693 480 ntBASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 RNGTTP1-201ENST00000420965 728 ntBASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 AC007559.1-201ENST00000428736 355 ntBASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 AC239367.3-201ENST00000428996 814 ntBASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 OR2B8P-201ENST00000432841 938 ntBASIC7.7□□□□□ -1.18
TMEM88BA6NKF7 GAPDHP58-201ENST00000438477 1006 ntBASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms