Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.18□□□□□ -1.74
RBFOX3A6NFN3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RBFOX3A6NFN3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.18□□□□□ -1.74
RBFOX3A6NFN3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RBFOX3A6NFN3 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RBFOX3A6NFN3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
RBFOX3A6NFN3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.18□□□□□ -1.74
RBFOX3A6NFN3 SALL4P2-201ENST00000423288 2910 ntBASIC4.18□□□□□ -1.74
RBFOX3A6NFN3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RBFOX3A6NFN3 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.18□□□□□ -1.74
RBFOX3A6NFN3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 UGT2B26P-201ENST00000508672 1613 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC107068.1-201ENST00000563286 4218 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 DDX18P4-201ENST00000511690 1966 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 RNU1-65P-201ENST00000363919 148 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 RBBP4P5-201ENST00000398583 1266 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 SNORA11.5-201ENST00000408163 128 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 RN7SKP108-201ENST00000411367 328 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 SEPT7P8-201ENST00000413308 775 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 NENFP1-201ENST00000419476 466 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AL358176.3-201ENST00000420757 454 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 BX119321.1-201ENST00000428912 797 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC023141.3-201ENST00000436698 278 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 ARMC4P1-201ENST00000438905 707 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 GEMIN2P1-201ENST00000454246 752 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 RN7SL254P-201ENST00000460609 284 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AP002884.1-201ENST00000479691 655 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC021006.1-201ENST00000489849 553 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC073073.1-201ENST00000493920 463 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 RN7SL362P-201ENST00000494228 267 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 KATNBL1P4-201ENST00000503545 918 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 HMGN1P16-201ENST00000508308 283 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 RPS27AP18-201ENST00000515536 459 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC011853.1-201ENST00000518911 454 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC025423.2-201ENST00000537570 439 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 HSPE1P2-201ENST00000554777 306 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC018552.1-201ENST00000562099 811 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AP005403.1-201ENST00000579720 229 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 MIR4502-201ENST00000580432 81 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AL353600.1-201ENST00000608148 251 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AL359091.2-201ENST00000609303 556 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 AL683826.1-201ENST00000624104 627 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RBFOX3A6NFN3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 AC027228.2-201ENST00000567141 2154 ntBASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 RLIMP2-201ENST00000427891 1563 ntBASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 AL133268.1-201ENST00000405676 1401 ntBASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 AC107977.1-201ENST00000355745 939 ntBASIC4.16□□□□□ -1.74
RBFOX3A6NFN3 RN7SKP171-201ENST00000364417 303 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms