Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SMIM28A0A1B0GU29 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 MTND2P40-201ENST00000436718 841 ntBASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 PA2G4P6-201ENST00000438325 1197 ntBASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 RPL34P20-201ENST00000442771 351 ntBASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 AL645937.3-201ENST00000453647 936 ntBASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 AC097173.1-201ENST00000505862 819 ntBASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 MIR4436B2-201ENST00000581415 91 ntBASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 MIR4436B1-201ENST00000583272 91 ntBASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 AP002884.5-201ENST00000595053 1132 ntBASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 AL139041.1-201ENST00000605480 610 ntBASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 EIF3FP1-201ENST00000613970 806 ntBASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 AC004158.1-201ENST00000564508 4319 ntBASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.54□□□□□ -1.52
SMIM28A0A1B0GU29 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 AC053481.2-202ENST00000582394 1500 ntBASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 OR1L6-202ENST00000373684 1044 ntBASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 SNORA48.4-201ENST00000391089 134 ntBASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 RNA5SP241-201ENST00000391326 114 ntBASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 AL133270.1-201ENST00000402635 279 ntBASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 HSPD1P12-201ENST00000429127 1069 ntBASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 NPM1P18-201ENST00000434232 732 ntBASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 AP006245.2-201ENST00000522004 300 ntBASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 AC093524.1-201ENST00000564266 1094 ntBASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 AC011840.5-201ENST00000582125 771 ntBASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 AC073429.2-201ENST00000569694 1444 ntBASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
SMIM28A0A1B0GU29 INTS6P1-201ENST00000504674 2530 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 TTC41P-205ENST00000551270 3963 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AL669831.5-218ENST00000591702 1873 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 SNORA51.8-201ENST00000384234 132 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 TRY2P-201ENST00000448860 689 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 HIGD1AP8-201ENST00000453927 274 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 snoU13.20-201ENST00000459180 104 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 RN7SL244P-201ENST00000493405 297 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms