Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
VTA1Q9NP79 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
VTA1Q9NP79 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VTA1Q9NP79 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
VTA1Q9NP79 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.98■■□□□ 1.11
VTA1Q9NP79 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.98■■□□□ 1.11
VTA1Q9NP79 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.98■■□□□ 1.11
VTA1Q9NP79 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
VTA1Q9NP79 AC020907.5-201ENST00000624372 1936 ntBASIC21.98■■□□□ 1.11
VTA1Q9NP79 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VTA1Q9NP79 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VTA1Q9NP79 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
VTA1Q9NP79 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
VTA1Q9NP79 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.97■■□□□ 1.11
VTA1Q9NP79 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VTA1Q9NP79 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VTA1Q9NP79 BX664615.1-201ENST00000443558 458 ntBASIC21.97■■□□□ 1.11
VTA1Q9NP79 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.97■■□□□ 1.11
VTA1Q9NP79 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.97■■□□□ 1.11
VTA1Q9NP79 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 AL160286.2-201ENST00000567150 934 ntBASIC21.96■■□□□ 1.11
VTA1Q9NP79 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
VTA1Q9NP79 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
VTA1Q9NP79 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.11
VTA1Q9NP79 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VTA1Q9NP79 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTA1Q9NP79 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTA1Q9NP79 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTA1Q9NP79 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
VTA1Q9NP79 WWOX-216ENST00000569818 525 ntBASIC21.95■■□□□ 1.1
VTA1Q9NP79 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.95■■□□□ 1.1
VTA1Q9NP79 AC010653.2-201ENST00000623505 997 ntBASIC21.95■■□□□ 1.1
VTA1Q9NP79 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VTA1Q9NP79 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
VTA1Q9NP79 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.95■■□□□ 1.1
VTA1Q9NP79 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.95■■□□□ 1.1
VTA1Q9NP79 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
VTA1Q9NP79 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
VTA1Q9NP79 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.94■■□□□ 1.1
VTA1Q9NP79 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTA1Q9NP79 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
VTA1Q9NP79 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTA1Q9NP79 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTA1Q9NP79 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.94■■□□□ 1.1
VTA1Q9NP79 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.94■■□□□ 1.1
VTA1Q9NP79 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.94■■□□□ 1.1
VTA1Q9NP79 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.94■■□□□ 1.1
VTA1Q9NP79 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VTA1Q9NP79 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
VTA1Q9NP79 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.94■■□□□ 1.1
VTA1Q9NP79 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
VTA1Q9NP79 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
VTA1Q9NP79 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.94■■□□□ 1.1
VTA1Q9NP79 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
VTA1Q9NP79 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.94■■□□□ 1.1
VTA1Q9NP79 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTA1Q9NP79 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTA1Q9NP79 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTA1Q9NP79 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTA1Q9NP79 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
VTA1Q9NP79 AK4P3-201ENST00000418260 669 ntBASIC21.93■■□□□ 1.1
VTA1Q9NP79 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
VTA1Q9NP79 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTA1Q9NP79 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
VTA1Q9NP79 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTA1Q9NP79 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
VTA1Q9NP79 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTA1Q9NP79 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTA1Q9NP79 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VTA1Q9NP79 FEM1AP1-201ENST00000431297 1995 ntBASIC21.92■■□□□ 1.1
VTA1Q9NP79 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTA1Q9NP79 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.92■■□□□ 1.1
VTA1Q9NP79 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.92■■□□□ 1.1
VTA1Q9NP79 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VTA1Q9NP79 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.92■■□□□ 1.1
VTA1Q9NP79 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTA1Q9NP79 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
VTA1Q9NP79 AC092338.2-201ENST00000568827 1415 ntBASIC21.92■■□□□ 1.1
VTA1Q9NP79 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTA1Q9NP79 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
VTA1Q9NP79 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
VTA1Q9NP79 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VTA1Q9NP79 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.92■■□□□ 1.1
VTA1Q9NP79 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTA1Q9NP79 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.92■■□□□ 1.1
VTA1Q9NP79 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VTA1Q9NP79 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.92■■□□□ 1.1
VTA1Q9NP79 AC007663.1-201ENST00000438948 1240 ntBASIC21.92■■□□□ 1.1
VTA1Q9NP79 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms