Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PCDH11XQ9BZA7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC25.51■■□□□ 1.67
PCDH11XQ9BZA7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.51■■□□□ 1.67
PCDH11XQ9BZA7 AP000550.4-202ENST00000639755 178 ntBASIC25.51■■□□□ 1.67
PCDH11XQ9BZA7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PCDH11XQ9BZA7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH11XQ9BZA7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 AP001271.2-201ENST00000624018 1556 ntBASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 AL512604.3-201ENST00000569583 964 ntBASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 AC011558.1-201ENST00000623459 338 ntBASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PCDH11XQ9BZA7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDH11XQ9BZA7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.49■■□□□ 1.67
PCDH11XQ9BZA7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDH11XQ9BZA7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.49■■□□□ 1.67
PCDH11XQ9BZA7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDH11XQ9BZA7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDH11XQ9BZA7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDH11XQ9BZA7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDH11XQ9BZA7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 AL121956.5-201ENST00000625261 221 ntBASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.48■■□□□ 1.67
PCDH11XQ9BZA7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC25.47■■□□□ 1.67
PCDH11XQ9BZA7 AC009947.2-201ENST00000444014 672 ntBASIC25.47■■□□□ 1.67
PCDH11XQ9BZA7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC25.47■■□□□ 1.67
PCDH11XQ9BZA7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC25.47■■□□□ 1.67
PCDH11XQ9BZA7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDH11XQ9BZA7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC25.47■■□□□ 1.67
PCDH11XQ9BZA7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC25.47■■□□□ 1.67
PCDH11XQ9BZA7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 HOMER2P1-201ENST00000455653 964 ntBASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PCDH11XQ9BZA7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.67
PCDH11XQ9BZA7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PCDH11XQ9BZA7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 AL031432.5-201ENST00000641059 760 ntBASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.66
PCDH11XQ9BZA7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDH11XQ9BZA7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC25.44■■□□□ 1.66
PCDH11XQ9BZA7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDH11XQ9BZA7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDH11XQ9BZA7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDH11XQ9BZA7 FAM86EP-206ENST00000510506 987 ntBASIC25.44■■□□□ 1.66
PCDH11XQ9BZA7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC25.44■■□□□ 1.66
PCDH11XQ9BZA7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDH11XQ9BZA7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC25.44■■□□□ 1.66
PCDH11XQ9BZA7 CKBP1-201ENST00000565489 1086 ntBASIC25.44■■□□□ 1.66
PCDH11XQ9BZA7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC25.44■■□□□ 1.66
PCDH11XQ9BZA7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDH11XQ9BZA7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms