Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 UNC93B2-201ENST00000285383 730 ntBASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRAIPQ9BWF2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 PHGDH-210ENST00000641115 1638 ntBASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 CR392000.1-201ENST00000624770 1228 ntBASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 AC079598.2-202ENST00000546624 1451 ntBASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRAIPQ9BWF2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 AC026271.3-201ENST00000571884 352 ntBASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.44■■□□□ 1.02
TRAIPQ9BWF2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAIPQ9BWF2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
TRAIPQ9BWF2 AL031985.4-201ENST00000642138 673 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms