Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.6■□□□□ 0.73
NDNQ99608 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.6■□□□□ 0.73
NDNQ99608 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.6■□□□□ 0.73
NDNQ99608 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.6■□□□□ 0.73
NDNQ99608 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.6■□□□□ 0.73
NDNQ99608 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.6■□□□□ 0.73
NDNQ99608 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.6■□□□□ 0.73
NDNQ99608 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 SLC29A4P1-201ENST00000398760 971 ntBASIC19.6■□□□□ 0.73
NDNQ99608 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NDNQ99608 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.6■□□□□ 0.73
NDNQ99608 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.6■□□□□ 0.73
NDNQ99608 AC092118.2-201ENST00000613495 667 ntBASIC19.6■□□□□ 0.73
NDNQ99608 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.6■□□□□ 0.73
NDNQ99608 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NDNQ99608 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.6■□□□□ 0.73
NDNQ99608 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
NDNQ99608 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
NDNQ99608 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NDNQ99608 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NDNQ99608 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
NDNQ99608 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDNQ99608 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.59■□□□□ 0.73
NDNQ99608 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
NDNQ99608 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDNQ99608 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NDNQ99608 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDNQ99608 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.59■□□□□ 0.73
NDNQ99608 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NDNQ99608 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
NDNQ99608 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.59■□□□□ 0.73
NDNQ99608 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDNQ99608 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NDNQ99608 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.59■□□□□ 0.73
NDNQ99608 AC091874.3-201ENST00000512672 1195 ntBASIC19.59■□□□□ 0.73
NDNQ99608 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.59■□□□□ 0.73
NDNQ99608 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.59■□□□□ 0.73
NDNQ99608 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NDNQ99608 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NDNQ99608 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NDNQ99608 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NDNQ99608 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NDNQ99608 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NDNQ99608 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NDNQ99608 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NDNQ99608 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NDNQ99608 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NDNQ99608 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NDNQ99608 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
NDNQ99608 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NDNQ99608 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.58■□□□□ 0.73
NDNQ99608 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NDNQ99608 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDNQ99608 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.58■□□□□ 0.72
NDNQ99608 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.58■□□□□ 0.72
NDNQ99608 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NDNQ99608 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.58■□□□□ 0.72
NDNQ99608 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.58■□□□□ 0.72
NDNQ99608 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDNQ99608 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDNQ99608 AC018553.1-201ENST00000616682 1458 ntBASIC19.58■□□□□ 0.72
NDNQ99608 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NDNQ99608 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.58■□□□□ 0.72
NDNQ99608 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.58■□□□□ 0.72
NDNQ99608 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NDNQ99608 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDNQ99608 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NDNQ99608 AC005332.7-201ENST00000614046 2005 ntBASIC19.58■□□□□ 0.72
NDNQ99608 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDNQ99608 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDNQ99608 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDNQ99608 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NDNQ99608 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.57■□□□□ 0.72
NDNQ99608 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDNQ99608 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDNQ99608 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.57■□□□□ 0.72
NDNQ99608 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.57■□□□□ 0.72
NDNQ99608 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.57■□□□□ 0.72
NDNQ99608 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.57■□□□□ 0.72
NDNQ99608 AC098934.4-201ENST00000564127 592 ntBASIC19.57■□□□□ 0.72
NDNQ99608 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.57■□□□□ 0.72
NDNQ99608 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDNQ99608 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NDNQ99608 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDNQ99608 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NDNQ99608 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
NDNQ99608 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NDNQ99608 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms