Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 SLC25A1P2-201ENST00000430693 912 ntBASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 AL512604.3-201ENST00000569583 964 ntBASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 AC027796.2-201ENST00000575326 344 ntBASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 LINC01311-201ENST00000565162 1445 ntBASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CNTNAP3BQ96NU0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 MRPL3P1-201ENST00000400109 1033 ntBASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 NUS1P1-201ENST00000446295 882 ntBASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CNTNAP3BQ96NU0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CNTNAP3BQ96NU0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
CNTNAP3BQ96NU0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 PMS2P2-201ENST00000425039 1128 ntBASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 KRT18P1-202ENST00000452408 1331 ntBASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CNTNAP3BQ96NU0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 HYMAI.1-201ENST00000620949 238 ntBASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 HLA-A-201ENST00000376802 1334 ntBASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 AC087742.1-201ENST00000575880 1738 ntBASIC18.69■□□□□ 0.58
CNTNAP3BQ96NU0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 AC092338.2-201ENST00000568827 1415 ntBASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 MIR564-202ENST00000385049 94 ntBASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CNTNAP3BQ96NU0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms