Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SPG11Q96JI7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SPG11Q96JI7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.64■□□□□ 0.25
SPG11Q96JI7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SPG11Q96JI7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.64■□□□□ 0.25
SPG11Q96JI7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 AC116351.2-201ENST00000606540 1585 ntBASIC16.64■□□□□ 0.25
SPG11Q96JI7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SPG11Q96JI7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.64■□□□□ 0.25
SPG11Q96JI7 AC246785.2-201ENST00000432512 513 ntBASIC16.64■□□□□ 0.25
SPG11Q96JI7 AL671277.2-201ENST00000458060 996 ntBASIC16.64■□□□□ 0.25
SPG11Q96JI7 PRSS44-201ENST00000515154 1146 ntBASIC16.64■□□□□ 0.25
SPG11Q96JI7 AC111152.3-201ENST00000569699 673 ntBASIC16.64■□□□□ 0.25
SPG11Q96JI7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SPG11Q96JI7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.63■□□□□ 0.25
SPG11Q96JI7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SPG11Q96JI7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SPG11Q96JI7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 EP400NL-214ENST00000641289 2402 ntBASIC16.63■□□□□ 0.25
SPG11Q96JI7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.63■□□□□ 0.25
SPG11Q96JI7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.63■□□□□ 0.25
SPG11Q96JI7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SPG11Q96JI7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SPG11Q96JI7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
SPG11Q96JI7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.62■□□□□ 0.25
SPG11Q96JI7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.62■□□□□ 0.25
SPG11Q96JI7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.62■□□□□ 0.25
SPG11Q96JI7 CKBP1-201ENST00000565489 1086 ntBASIC16.62■□□□□ 0.25
SPG11Q96JI7 MIR3180-1-201ENST00000580374 94 ntBASIC16.62■□□□□ 0.25
SPG11Q96JI7 MIR3180-3-201ENST00000584616 94 ntBASIC16.62■□□□□ 0.25
SPG11Q96JI7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.62■□□□□ 0.25
SPG11Q96JI7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.62■□□□□ 0.25
SPG11Q96JI7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SPG11Q96JI7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 AC004980.1-204ENST00000429707 299 ntBASIC16.62■□□□□ 0.25
SPG11Q96JI7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.62■□□□□ 0.25
SPG11Q96JI7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.62■□□□□ 0.25
SPG11Q96JI7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.62■□□□□ 0.25
SPG11Q96JI7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SPG11Q96JI7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SPG11Q96JI7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SPG11Q96JI7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPG11Q96JI7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.61■□□□□ 0.25
SPG11Q96JI7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.61■□□□□ 0.25
SPG11Q96JI7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.61■□□□□ 0.25
SPG11Q96JI7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SPG11Q96JI7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPG11Q96JI7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SPG11Q96JI7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPG11Q96JI7 AP000347.1-202ENST00000435868 847 ntBASIC16.61■□□□□ 0.25
SPG11Q96JI7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.61■□□□□ 0.25
SPG11Q96JI7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
SPG11Q96JI7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.61■□□□□ 0.25
SPG11Q96JI7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPG11Q96JI7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SPG11Q96JI7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPG11Q96JI7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SPG11Q96JI7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SPG11Q96JI7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.6■□□□□ 0.25
SPG11Q96JI7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SPG11Q96JI7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.6■□□□□ 0.25
SPG11Q96JI7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.6■□□□□ 0.25
SPG11Q96JI7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms