Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL22A1Q8NFW1 KRT16P6-202ENST00000425692 1426 ntBASIC26.32■■□□□ 1.8
COL22A1Q8NFW1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
COL22A1Q8NFW1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
COL22A1Q8NFW1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC26.32■■□□□ 1.8
COL22A1Q8NFW1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC26.32■■□□□ 1.8
COL22A1Q8NFW1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC26.32■■□□□ 1.8
COL22A1Q8NFW1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.32■■□□□ 1.8
COL22A1Q8NFW1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 KRT18P1-202ENST00000452408 1331 ntBASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 KRT8P41-201ENST00000533985 1514 ntBASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 SLC25A6P4-201ENST00000586535 553 ntBASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 AC104692.2-201ENST00000603054 253 ntBASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC26.31■■□□□ 1.8
COL22A1Q8NFW1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL22A1Q8NFW1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC26.3■■□□□ 1.8
COL22A1Q8NFW1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC26.3■■□□□ 1.8
COL22A1Q8NFW1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL22A1Q8NFW1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC26.3■■□□□ 1.8
COL22A1Q8NFW1 AL160286.2-201ENST00000567150 934 ntBASIC26.3■■□□□ 1.8
COL22A1Q8NFW1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC26.3■■□□□ 1.8
COL22A1Q8NFW1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL22A1Q8NFW1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
COL22A1Q8NFW1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
COL22A1Q8NFW1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
COL22A1Q8NFW1 DPP3P2-201ENST00000416030 1696 ntBASIC26.3■■□□□ 1.8
COL22A1Q8NFW1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL22A1Q8NFW1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC26.29■■□□□ 1.8
COL22A1Q8NFW1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
COL22A1Q8NFW1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
COL22A1Q8NFW1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
COL22A1Q8NFW1 AP002383.4-201ENST00000442518 975 ntBASIC26.29■■□□□ 1.8
COL22A1Q8NFW1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC26.29■■□□□ 1.8
COL22A1Q8NFW1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC26.29■■□□□ 1.8
COL22A1Q8NFW1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC26.29■■□□□ 1.8
COL22A1Q8NFW1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC26.29■■□□□ 1.8
COL22A1Q8NFW1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 AL732292.2-201ENST00000609649 430 ntBASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
COL22A1Q8NFW1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC26.27■■□□□ 1.8
COL22A1Q8NFW1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
COL22A1Q8NFW1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC26.27■■□□□ 1.8
COL22A1Q8NFW1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL22A1Q8NFW1 AC244015.2-201ENST00000616358 1861 ntBASIC26.27■■□□□ 1.8
COL22A1Q8NFW1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.27■■□□□ 1.8
COL22A1Q8NFW1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
COL22A1Q8NFW1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL22A1Q8NFW1 EMBP1-201ENST00000458200 901 ntBASIC26.27■■□□□ 1.8
COL22A1Q8NFW1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC26.27■■□□□ 1.8
COL22A1Q8NFW1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL22A1Q8NFW1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
COL22A1Q8NFW1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 AC106795.1-205ENST00000512851 1056 ntBASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC26.26■■□□□ 1.79
COL22A1Q8NFW1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL22A1Q8NFW1 AC121338.2-201ENST00000622535 1744 ntBASIC26.25■■□□□ 1.79
COL22A1Q8NFW1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL22A1Q8NFW1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL22A1Q8NFW1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC26.25■■□□□ 1.79
COL22A1Q8NFW1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC26.25■■□□□ 1.79
COL22A1Q8NFW1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC26.25■■□□□ 1.79
COL22A1Q8NFW1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.25■■□□□ 1.79
COL22A1Q8NFW1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
COL22A1Q8NFW1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
COL22A1Q8NFW1 AL049796.1-201ENST00000565336 1766 ntBASIC26.25■■□□□ 1.79
COL22A1Q8NFW1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms