Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
VPS13BQ7Z7G8 AC012676.1-201ENST00000574705 1949 ntBASIC12.15□□□□□ -0.47
VPS13BQ7Z7G8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
VPS13BQ7Z7G8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC12.15□□□□□ -0.47
VPS13BQ7Z7G8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
VPS13BQ7Z7G8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
VPS13BQ7Z7G8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
VPS13BQ7Z7G8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.15□□□□□ -0.47
VPS13BQ7Z7G8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.15□□□□□ -0.47
VPS13BQ7Z7G8 AC008622.2-201ENST00000617006 1229 ntBASIC12.15□□□□□ -0.47
VPS13BQ7Z7G8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 MIR3180-1-201ENST00000580374 94 ntBASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 MIR3180-3-201ENST00000584616 94 ntBASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 GOLGA6L3-201ENST00000507199 1679 ntBASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 C1QL1P1-201ENST00000568105 661 ntBASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 AC007225.1-201ENST00000566331 1836 ntBASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 AC121338.2-201ENST00000622535 1744 ntBASIC12.14□□□□□ -0.47
VPS13BQ7Z7G8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 AL049796.1-201ENST00000565336 1766 ntBASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 AC007663.1-201ENST00000438948 1240 ntBASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 AC092647.4-201ENST00000457211 535 ntBASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 AC010653.2-201ENST00000623505 997 ntBASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 AC096733.2-201ENST00000609937 1394 ntBASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VPS13BQ7Z7G8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 YBX1P10-201ENST00000444752 975 ntBASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 KRT8P45-201ENST00000414328 1447 ntBASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 TFP1-202ENST00000475455 1573 ntBASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 AL390719.1-204ENST00000412397 1219 ntBASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 FDX1P1-201ENST00000449115 551 ntBASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.12□□□□□ -0.47
VPS13BQ7Z7G8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.11□□□□□ -0.47
VPS13BQ7Z7G8 KRT17P6-201ENST00000453795 1220 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms