Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN17P56750 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CLDN17P56750 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN17P56750 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN17P56750 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.49■□□□□ 0.39
CLDN17P56750 PRKY-204ENST00000533551 1019 ntBASIC17.49■□□□□ 0.39
CLDN17P56750 AC069544.1-201ENST00000609399 999 ntBASIC17.49■□□□□ 0.39
CLDN17P56750 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.49■□□□□ 0.39
CLDN17P56750 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN17P56750 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN17P56750 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CLDN17P56750 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN17P56750 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN17P56750 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.49■□□□□ 0.39
CLDN17P56750 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLDN17P56750 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN17P56750 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN17P56750 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN17P56750 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN17P56750 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN17P56750 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CLDN17P56750 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN17P56750 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN17P56750 AP006587.1-201ENST00000534129 1502 ntBASIC17.48■□□□□ 0.39
CLDN17P56750 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CLDN17P56750 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN17P56750 AL158211.5-201ENST00000623583 2518 ntBASIC17.48■□□□□ 0.39
CLDN17P56750 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CLDN17P56750 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN17P56750 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLDN17P56750 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN17P56750 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN17P56750 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN17P56750 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN17P56750 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN17P56750 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN17P56750 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN17P56750 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN17P56750 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN17P56750 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN17P56750 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN17P56750 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN17P56750 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.48■□□□□ 0.39
CLDN17P56750 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.48■□□□□ 0.39
CLDN17P56750 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN17P56750 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLDN17P56750 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CLDN17P56750 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CLDN17P56750 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLDN17P56750 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN17P56750 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CLDN17P56750 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CLDN17P56750 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLDN17P56750 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 POU5F1P3-201ENST00000428824 1078 ntBASIC17.47■□□□□ 0.39
CLDN17P56750 AC233263.1-201ENST00000578059 224 ntBASIC17.47■□□□□ 0.39
CLDN17P56750 AC006058.3-201ENST00000606217 1069 ntBASIC17.47■□□□□ 0.39
CLDN17P56750 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN17P56750 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLDN17P56750 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CLDN17P56750 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN17P56750 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.47■□□□□ 0.39
CLDN17P56750 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CLDN17P56750 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CLDN17P56750 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.47■□□□□ 0.39
CLDN17P56750 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN17P56750 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.46■□□□□ 0.39
CLDN17P56750 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CLDN17P56750 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN17P56750 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN17P56750 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN17P56750 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN17P56750 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN17P56750 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN17P56750 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN17P56750 FAM201B-201ENST00000458407 597 ntBASIC17.46■□□□□ 0.39
CLDN17P56750 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
CLDN17P56750 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN17P56750 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.46■□□□□ 0.39
CLDN17P56750 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN17P56750 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN17P56750 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CLDN17P56750 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms