Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
MMP13P45452 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
MMP13P45452 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MMP13P45452 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP13P45452 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP13P45452 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.35■□□□□ 0.85
MMP13P45452 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
MMP13P45452 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP13P45452 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP13P45452 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP13P45452 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP13P45452 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP13P45452 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP13P45452 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP13P45452 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP13P45452 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.35■□□□□ 0.85
MMP13P45452 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP13P45452 AC005829.2-201ENST00000571422 1056 ntBASIC20.35■□□□□ 0.85
MMP13P45452 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
MMP13P45452 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP13P45452 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.35■□□□□ 0.85
MMP13P45452 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP13P45452 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP13P45452 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP13P45452 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MMP13P45452 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP13P45452 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
MMP13P45452 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.34■□□□□ 0.85
MMP13P45452 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP13P45452 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 PNMA6B-201ENST00000538162 1200 ntBASIC20.34■□□□□ 0.85
MMP13P45452 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.34■□□□□ 0.85
MMP13P45452 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP13P45452 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.34■□□□□ 0.85
MMP13P45452 KRT16P6-202ENST00000425692 1426 ntBASIC20.34■□□□□ 0.85
MMP13P45452 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
MMP13P45452 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
MMP13P45452 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.33■□□□□ 0.85
MMP13P45452 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP13P45452 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP13P45452 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.33■□□□□ 0.85
MMP13P45452 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP13P45452 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP13P45452 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MMP13P45452 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.33■□□□□ 0.85
MMP13P45452 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.33■□□□□ 0.85
MMP13P45452 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP13P45452 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MMP13P45452 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.33■□□□□ 0.85
MMP13P45452 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.33■□□□□ 0.85
MMP13P45452 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
MMP13P45452 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
MMP13P45452 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
MMP13P45452 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MMP13P45452 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP13P45452 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP13P45452 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP13P45452 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
MMP13P45452 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP13P45452 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP13P45452 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
MMP13P45452 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP13P45452 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MMP13P45452 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP13P45452 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP13P45452 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.32■□□□□ 0.84
MMP13P45452 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.32■□□□□ 0.84
MMP13P45452 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
MMP13P45452 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP13P45452 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.32■□□□□ 0.84
MMP13P45452 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.32■□□□□ 0.84
MMP13P45452 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP13P45452 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP13P45452 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MMP13P45452 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.32■□□□□ 0.84
MMP13P45452 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
MMP13P45452 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.31■□□□□ 0.84
MMP13P45452 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MMP13P45452 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
MMP13P45452 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms