Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.93■□□□□ 0.78
NFKB1P19838 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NFKB1P19838 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
NFKB1P19838 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NFKB1P19838 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.93■□□□□ 0.78
NFKB1P19838 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.93■□□□□ 0.78
NFKB1P19838 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.92■□□□□ 0.78
NFKB1P19838 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.92■□□□□ 0.78
NFKB1P19838 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
NFKB1P19838 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NFKB1P19838 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.92■□□□□ 0.78
NFKB1P19838 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
NFKB1P19838 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.92■□□□□ 0.78
NFKB1P19838 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.92■□□□□ 0.78
NFKB1P19838 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.92■□□□□ 0.78
NFKB1P19838 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.92■□□□□ 0.78
NFKB1P19838 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 AL121829.2-201ENST00000620908 328 ntBASIC19.92■□□□□ 0.78
NFKB1P19838 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.92■□□□□ 0.78
NFKB1P19838 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.92■□□□□ 0.78
NFKB1P19838 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.92■□□□□ 0.78
NFKB1P19838 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.92■□□□□ 0.78
NFKB1P19838 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.92■□□□□ 0.78
NFKB1P19838 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NFKB1P19838 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NFKB1P19838 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.92■□□□□ 0.78
NFKB1P19838 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NFKB1P19838 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.91■□□□□ 0.78
NFKB1P19838 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NFKB1P19838 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 POM121L13P-201ENST00000422362 380 ntBASIC19.91■□□□□ 0.78
NFKB1P19838 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
NFKB1P19838 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 AP003097.1-201ENST00000530657 1135 ntBASIC19.91■□□□□ 0.78
NFKB1P19838 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
NFKB1P19838 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.91■□□□□ 0.78
NFKB1P19838 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.91■□□□□ 0.78
NFKB1P19838 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.91■□□□□ 0.78
NFKB1P19838 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NFKB1P19838 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.91■□□□□ 0.78
NFKB1P19838 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NFKB1P19838 AP006587.1-201ENST00000534129 1502 ntBASIC19.91■□□□□ 0.78
NFKB1P19838 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.91■□□□□ 0.78
NFKB1P19838 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NFKB1P19838 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.9■□□□□ 0.78
NFKB1P19838 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.9■□□□□ 0.78
NFKB1P19838 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.9■□□□□ 0.78
NFKB1P19838 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.9■□□□□ 0.78
NFKB1P19838 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.9■□□□□ 0.78
NFKB1P19838 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.9■□□□□ 0.78
NFKB1P19838 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.9■□□□□ 0.78
NFKB1P19838 Z82202.1-201ENST00000623446 1880 ntBASIC19.9■□□□□ 0.78
NFKB1P19838 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NFKB1P19838 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.9■□□□□ 0.78
NFKB1P19838 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.9■□□□□ 0.78
NFKB1P19838 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NFKB1P19838 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NFKB1P19838 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NFKB1P19838 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NFKB1P19838 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
NFKB1P19838 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NFKB1P19838 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NFKB1P19838 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms