Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.38■■□□□ 1.01
CHRNA1P02708 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.38■■□□□ 1.01
CHRNA1P02708 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.38■■□□□ 1.01
CHRNA1P02708 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.38■■□□□ 1.01
CHRNA1P02708 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHRNA1P02708 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHRNA1P02708 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.38■■□□□ 1.01
CHRNA1P02708 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.38■■□□□ 1.01
CHRNA1P02708 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHRNA1P02708 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHRNA1P02708 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHRNA1P02708 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CHRNA1P02708 AC020907.5-201ENST00000624372 1936 ntBASIC21.37■■□□□ 1.01
CHRNA1P02708 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHRNA1P02708 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CHRNA1P02708 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CHRNA1P02708 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHRNA1P02708 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHRNA1P02708 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.37■■□□□ 1.01
CHRNA1P02708 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHRNA1P02708 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.37■■□□□ 1.01
CHRNA1P02708 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHRNA1P02708 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHRNA1P02708 AC007375.3-201ENST00000600936 2314 ntBASIC21.37■■□□□ 1.01
CHRNA1P02708 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.36■■□□□ 1.01
CHRNA1P02708 AP001271.2-201ENST00000624018 1556 ntBASIC21.36■■□□□ 1.01
CHRNA1P02708 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.36■■□□□ 1.01
CHRNA1P02708 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHRNA1P02708 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHRNA1P02708 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.36■■□□□ 1.01
CHRNA1P02708 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.36■■□□□ 1.01
CHRNA1P02708 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CHRNA1P02708 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.36■■□□□ 1.01
CHRNA1P02708 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.36■■□□□ 1.01
CHRNA1P02708 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CHRNA1P02708 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHRNA1P02708 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHRNA1P02708 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.35■■□□□ 1.01
CHRNA1P02708 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHRNA1P02708 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHRNA1P02708 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHRNA1P02708 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHRNA1P02708 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHRNA1P02708 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.35■■□□□ 1.01
CHRNA1P02708 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHRNA1P02708 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.35■■□□□ 1.01
CHRNA1P02708 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHRNA1P02708 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
CHRNA1P02708 BX664615.1-201ENST00000443558 458 ntBASIC21.35■■□□□ 1.01
CHRNA1P02708 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.35■■□□□ 1.01
CHRNA1P02708 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.35■■□□□ 1.01
CHRNA1P02708 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.35■■□□□ 1.01
CHRNA1P02708 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.35■■□□□ 1.01
CHRNA1P02708 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHRNA1P02708 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHRNA1P02708 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHRNA1P02708 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.35■■□□□ 1.01
CHRNA1P02708 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHRNA1P02708 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHRNA1P02708 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CHRNA1P02708 FEM1AP1-201ENST00000431297 1995 ntBASIC21.34■■□□□ 1.01
CHRNA1P02708 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.34■■□□□ 1.01
CHRNA1P02708 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CHRNA1P02708 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CHRNA1P02708 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.34■■□□□ 1.01
CHRNA1P02708 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.34■■□□□ 1.01
CHRNA1P02708 HMGA1P5-201ENST00000412453 271 ntBASIC21.34■■□□□ 1.01
CHRNA1P02708 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.34■■□□□ 1.01
CHRNA1P02708 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.34■■□□□ 1.01
CHRNA1P02708 AC116562.4-202ENST00000641738 218 ntBASIC21.34■■□□□ 1.01
CHRNA1P02708 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHRNA1P02708 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHRNA1P02708 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHRNA1P02708 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
CHRNA1P02708 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHRNA1P02708 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHRNA1P02708 LINC01465-201ENST00000408887 1940 ntBASIC21.33■■□□□ 1.01
CHRNA1P02708 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHRNA1P02708 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHRNA1P02708 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHRNA1P02708 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.33■■□□□ 1.01
CHRNA1P02708 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHRNA1P02708 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CHRNA1P02708 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.33■■□□□ 1.01
CHRNA1P02708 AK4P3-201ENST00000418260 669 ntBASIC21.33■■□□□ 1.01
CHRNA1P02708 SLC25A1P2-201ENST00000430693 912 ntBASIC21.33■■□□□ 1.01
CHRNA1P02708 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.33■■□□□ 1.01
CHRNA1P02708 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.33■■□□□ 1.01
CHRNA1P02708 AC087388.1-201ENST00000571370 1112 ntBASIC21.33■■□□□ 1.01
CHRNA1P02708 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CHRNA1P02708 AL138966.2-201ENST00000621997 464 ntBASIC21.33■■□□□ 1.01
CHRNA1P02708 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHRNA1P02708 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CHRNA1P02708 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.32■■□□□ 1
CHRNA1P02708 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
CHRNA1P02708 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CHRNA1P02708 AC073314.1-201ENST00000568729 2216 ntBASIC21.32■■□□□ 1
CHRNA1P02708 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHRNA1P02708 AC117947.1-201ENST00000427448 529 ntBASIC21.32■■□□□ 1
CHRNA1P02708 AC007663.1-201ENST00000438948 1240 ntBASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms