Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC026271.3-201ENST00000571884 352 ntBASIC21.06■□□□□ 0.96
SMIM28A0A1B0GU29 AC131212.4-201ENST00000623606 975 ntBASIC21.06■□□□□ 0.96
SMIM28A0A1B0GU29 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMIM28A0A1B0GU29 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMIM28A0A1B0GU29 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.06■□□□□ 0.96
SMIM28A0A1B0GU29 AC112907.3-201ENST00000577781 2400 ntBASIC21.06■□□□□ 0.96
SMIM28A0A1B0GU29 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SMIM28A0A1B0GU29 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 MMP23A-201ENST00000234610 1017 ntBASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 AP000525.1-201ENST00000608286 694 ntBASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMIM28A0A1B0GU29 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 AC011506.1-201ENST00000474329 610 ntBASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 MIR6786-201ENST00000616843 113 ntBASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 AC133561.5-201ENST00000635547 218 ntBASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 FSCN1P1-201ENST00000568912 1481 ntBASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 LINC01521-201ENST00000504184 1943 ntBASIC21.04■□□□□ 0.96
SMIM28A0A1B0GU29 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM28A0A1B0GU29 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM28A0A1B0GU29 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM28A0A1B0GU29 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM28A0A1B0GU29 B3GAT3P1-201ENST00000471720 806 ntBASIC21.03■□□□□ 0.96
SMIM28A0A1B0GU29 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.03■□□□□ 0.96
SMIM28A0A1B0GU29 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.03■□□□□ 0.96
SMIM28A0A1B0GU29 LINC01023-201ENST00000606054 436 ntBASIC21.03■□□□□ 0.96
SMIM28A0A1B0GU29 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.03■□□□□ 0.96
SMIM28A0A1B0GU29 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.03■□□□□ 0.96
SMIM28A0A1B0GU29 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMIM28A0A1B0GU29 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.03■□□□□ 0.96
SMIM28A0A1B0GU29 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.02■□□□□ 0.96
SMIM28A0A1B0GU29 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMIM28A0A1B0GU29 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
SMIM28A0A1B0GU29 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMIM28A0A1B0GU29 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 MIR1238-201ENST00000408483 83 ntBASIC21.01■□□□□ 0.95
SMIM28A0A1B0GU29 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms