Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 PPIAP22-201ENST00000358455 498 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 RN7SKP174-201ENST00000363803 330 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AL356057.3-201ENST00000402607 340 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 MTCYBP36-201ENST00000404146 440 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AC006509.1-201ENST00000420788 634 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AL451074.4-201ENST00000447545 470 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 SRP68P2-201ENST00000456184 254 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 RPS7P6-201ENST00000485777 579 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 RN7SL868P-201ENST00000485915 303 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 RPL29P23-201ENST00000486188 442 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 NIFKP7-201ENST00000503365 834 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 DNAJC8P1-201ENST00000554535 372 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AC010287.1-201ENST00000566916 357 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AC036176.3-201ENST00000602456 418 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 MIR6849-201ENST00000618543 69 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AC012629.3-201ENST00000623397 328 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AL683826.1-201ENST00000624104 627 ntBASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HPS5Q9UPZ3 HSPD1P7-201ENST00000447985 1686 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 ZNF519P1-201ENST00000449011 1626 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 PLEKHG4B-204ENST00000637938 12612 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 RNU6-1309P-201ENST00000363305 108 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AL354719.1-201ENST00000406535 843 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AL365400.1-201ENST00000431854 640 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 ARL2BPP10-201ENST00000446487 531 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 OR7E7P-201ENST00000455678 1012 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 MTND5P22-201ENST00000458380 195 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AC117395.2-201ENST00000463122 1128 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AP003385.3-201ENST00000472498 287 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AC091544.1-201ENST00000484702 348 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 RN7SL518P-201ENST00000491887 280 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 RN7SL568P-201ENST00000493069 298 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 RN7SL569P-201ENST00000494652 288 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AC114324.2-202ENST00000503812 134 ntBASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.65□□□□□ -1.02
HPS5Q9UPZ3 AC044913.1-201ENST00000557200 430 ntBASIC8.65□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms