Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC022360.1-201ENST00000521058 340 ntBASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 MIR7853-201ENST00000584820 132 ntBASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 AC105254.2-201ENST00000603636 436 ntBASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SHANK2Q9UPX8 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SHANK2Q9UPX8 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
SHANK2Q9UPX8 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.71□□□□□ -1.17
SHANK2Q9UPX8 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SHANK2Q9UPX8 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
SHANK2Q9UPX8 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC7.71□□□□□ -1.17
SHANK2Q9UPX8 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.71□□□□□ -1.17
SHANK2Q9UPX8 EEF1A1P36-201ENST00000427807 1351 ntBASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 GLULP6-201ENST00000399502 913 ntBASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 AL049693.1-201ENST00000402760 611 ntBASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 SNX10-203ENST00000409367 746 ntTSL 5 BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 CNOT7P1-201ENST00000429006 852 ntBASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 HSPD1P12-201ENST00000429127 1069 ntBASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 AL590399.4-201ENST00000436561 601 ntBASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 RBMY2TP-201ENST00000451162 947 ntBASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 NUTF2P7-201ENST00000453086 375 ntBASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 UBE2FP2-201ENST00000566646 462 ntBASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 AC025857.2-201ENST00000602711 238 ntBASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 AC005377.1-201ENST00000605126 456 ntBASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 AC073342.2-201ENST00000595842 1800 ntBASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
SHANK2Q9UPX8 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 SNORA66-201ENST00000384792 133 ntBASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 RNU2-50P-201ENST00000410494 143 ntBASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 AL158827.1-201ENST00000416300 391 ntBASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 AC017019.1-201ENST00000426129 261 ntBASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 AC063976.2-201ENST00000425667 3556 ntBASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SHANK2Q9UPX8 OR8V1P-201ENST00000395193 873 ntBASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 RN7SL604P-201ENST00000492589 296 ntBASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 BGLT3-201ENST00000564523 994 ntBASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 TVP23CP2-201ENST00000571473 623 ntBASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 AC093388.1-201ENST00000609166 430 ntBASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 AL117339.4-201ENST00000608335 7063 ntBASIC7.69□□□□□ -1.18
SHANK2Q9UPX8 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms