Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AP001269.3-201ENST00000588718 329 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AC007621.1-201ENST00000604544 437 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AP000860.1-201ENST00000605250 559 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AL445423.1-201ENST00000609941 536 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AC090617.9-201ENST00000623751 147 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AL049541.2-201ENST00000626377 555 ntBASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC8.83□□□□□ -1
PDZRN3Q9UPQ7 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AL079343.1-201ENST00000572358 1771 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AC102941.1-201ENST00000567616 1537 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 ODF3-202ENST00000342593 386 ntTSL 5 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 RN7SKP269-201ENST00000365545 319 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 IARS-201ENST00000375627 697 ntTSL 3 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 Y_RNA.453-201ENST00000384223 109 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AC092601.1-201ENST00000444526 383 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 RPL7AP71-201ENST00000451120 739 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AC037198.2-201ENST00000478845 733 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 ARL2BPP4-201ENST00000506854 471 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 DUXAP1-201ENST00000556632 463 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AC023827.2-201ENST00000566880 1061 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 ISCA1P3-201ENST00000577104 373 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AC087283.1-201ENST00000604029 1074 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AC124303.1-201ENST00000605703 360 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AL589743.7-201ENST00000612637 233 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 AC092162.3-201ENST00000624511 1624 ntBASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC8.82□□□□□ -1
PDZRN3Q9UPQ7 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 MTND5P26-201ENST00000426018 1752 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 AC009948.3-201ENST00000603415 1798 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 AL359715.4-201ENST00000606629 1436 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 ZNF840P-201ENST00000504759 1996 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 RNU1-35P-201ENST00000362782 153 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 RNU4-70P-201ENST00000384579 139 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 VIM2P-201ENST00000402383 1294 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 RN7SKP254-201ENST00000410685 310 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 AC002524.1-201ENST00000411687 547 ntBASIC8.81□□□□□ -1
PDZRN3Q9UPQ7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms