Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 EIF1-207ENST00000591776 797 ntTSL 4 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AL589765.5-201ENST00000596133 515 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC016727.2-201ENST00000603988 621 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 FAM157A-202ENST00000615155 405 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC099494.2-201ENST00000623371 978 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC067931.1-201ENST00000624190 671 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 NMD3P1-201ENST00000439704 1488 ntBASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TRIM35Q9UPQ4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
TRIM35Q9UPQ4 CD86-209ENST00000493101 1572 ntTSL 2 BASIC9.71□□□□□ -0.85
TRIM35Q9UPQ4 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
TRIM35Q9UPQ4 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
TRIM35Q9UPQ4 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
TRIM35Q9UPQ4 AC007342.7-201ENST00000624610 2337 ntBASIC9.71□□□□□ -0.85
TRIM35Q9UPQ4 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
TRIM35Q9UPQ4 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
TRIM35Q9UPQ4 AC016251.1-201ENST00000624299 4198 ntBASIC9.71□□□□□ -0.85
TRIM35Q9UPQ4 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
TRIM35Q9UPQ4 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
TRIM35Q9UPQ4 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC9.71□□□□□ -0.85
TRIM35Q9UPQ4 Y_RNA.158-201ENST00000363651 101 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 AC244505.2-201ENST00000435089 759 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 RAB9AP5-201ENST00000437794 597 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 FUNDC2P2-202ENST00000443452 493 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 RAB9AP2-201ENST00000443911 597 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 CHCHD2P7-201ENST00000508008 452 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 AC016559.1-201ENST00000511420 199 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 AC097460.2-201ENST00000511857 741 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 OR5F2P-201ENST00000532761 941 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 AL589863.1-201ENST00000595383 631 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 AC143336.1-201ENST00000614164 836 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 uc_338.21-201ENST00000622458 147 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 AP003471.1-202ENST00000319051 1988 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 LRRC37A17P-201ENST00000570311 4693 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 NACA-216ENST00000550952 2922 ntTSL 2 BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 AC087501.5-201ENST00000607496 2374 ntBASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
TRIM35Q9UPQ4 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 ZHX3-214ENST00000559234 6296 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 Y_RNA.148-201ENST00000363557 117 ntBASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 AL355375.1-201ENST00000405686 392 ntBASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 HMGB1P11-201ENST00000413899 637 ntBASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 AMMECR1-IT1-201ENST00000418848 561 ntTSL 5 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 NIP7P1-201ENST00000433227 512 ntBASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 CYCSP11-201ENST00000436426 315 ntBASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 AC092421.1-201ENST00000448148 418 ntBASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 AC016489.1-201ENST00000461109 375 ntBASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 RPS20P4-201ENST00000461659 355 ntBASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 RN7SL688P-201ENST00000471754 275 ntBASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 TRBV1-201ENST00000476502 284 ntBASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 AC018639.1-201ENST00000492994 442 ntBASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TRIM35Q9UPQ4 AC106760.2-201ENST00000504159 619 ntBASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms