Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 NPIPB1P-202ENST00000588786 828 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC011445.2-201ENST00000599274 173 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC141002.1-201ENST00000607025 279 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC108673.3-201ENST00000609183 335 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC096586.1-201ENST00000610267 561 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 MIR7973-1-201ENST00000614683 76 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 AL627171.1-201ENST00000618845 1308 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 AC018659.2-201ENST00000624690 715 ntBASIC5.61□□□□□ -1.51
LRFN1Q9P244 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.61□□□□□ -1.51
LRFN1Q9P244 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LRFN1Q9P244 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AP002512.4-202ENST00000641599 4530 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRFN1Q9P244 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC011815.2-201ENST00000618230 2021 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRFN1Q9P244 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRFN1Q9P244 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 MTCO1P11-201ENST00000429111 1528 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRFN1Q9P244 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRFN1Q9P244 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRFN1Q9P244 RNA5SP375-201ENST00000362975 119 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 RN7SKP81-201ENST00000365603 331 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRFN1Q9P244 RNU6-932P-201ENST00000391108 106 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AL360271.1-201ENST00000395679 510 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AL451046.1-201ENST00000406097 534 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 HMGB3P18-201ENST00000406327 590 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 MTND4P11-201ENST00000417020 1058 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC104843.2-201ENST00000427666 297 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 RPL7P29-201ENST00000437151 728 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 MED6P1-201ENST00000439659 713 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AL035407.2-201ENST00000454090 378 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 RN7SL174P-201ENST00000475578 289 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC074386.1-201ENST00000476560 767 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 RPL7P40-201ENST00000481703 745 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 CR383656.1-201ENST00000484916 377 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC111193.1-201ENST00000504097 155 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 MTATP6P1-201ENST00000514057 681 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 Y_RNA.667-201ENST00000516212 107 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 SCARNA18.1-201ENST00000516330 83 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC027104.1-201ENST00000563702 681 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AP005119.1-201ENST00000580956 292 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC005244.1-201ENST00000582566 339 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AL121890.3-201ENST00000618494 516 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 TCL6_3.1-201ENST00000619064 137 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC091046.2-201ENST00000620775 665 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AL137067.2-201ENST00000621202 131 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AP001002.2-201ENST00000625137 386 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AP001153.1-201ENST00000641024 338 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRFN1Q9P244 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRFN1Q9P244 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LRFN1Q9P244 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
LRFN1Q9P244 AC097063.1-201ENST00000426714 1797 ntBASIC5.6□□□□□ -1.51
LRFN1Q9P244 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LRFN1Q9P244 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms