Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 EI24P4-201ENST00000423683 1078 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC093655.2-201ENST00000425735 631 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 FAM96AP1-201ENST00000430879 482 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC009238.2-201ENST00000431026 355 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 PCNPP2-201ENST00000441651 455 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 SETP20-201ENST00000457046 852 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 RPL7P51-201ENST00000490532 749 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 ENPP7P11-201ENST00000505915 627 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC069307.1-201ENST00000602820 447 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC108359.1-201ENST00000616451 1211 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 OR8G7P-201ENST00000616658 848 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 AC136428.4-201ENST00000634254 1155 ntBASIC5.22□□□□□ -1.57
TREX1Q9NSU2 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
TREX1Q9NSU2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
TREX1Q9NSU2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 RNU6-249P-201ENST00000363016 102 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AL050305.1-201ENST00000399993 1230 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 NUDT19P3-201ENST00000404698 555 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AL513325.1-201ENST00000417716 1034 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 BX119904.3-201ENST00000428194 957 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 UBE2V2P4-201ENST00000447495 259 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AC015864.1-201ENST00000496512 544 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 NIFKP7-201ENST00000503365 834 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AC097173.1-201ENST00000505862 819 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AL359219.2-201ENST00000555184 348 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AC090527.3-201ENST00000619041 548 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AC073136.1-201ENST00000449426 2884 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 AC019072.1-201ENST00000604535 1551 ntBASIC5.21□□□□□ -1.58
TREX1Q9NSU2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 RN7SKP81-201ENST00000365603 331 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 SNORA67-201ENST00000384423 137 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 PCNPP4-201ENST00000414817 517 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AC234781.4-201ENST00000419384 244 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 GNG5P5-201ENST00000420444 220 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 RPS4XP16-201ENST00000427198 791 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 RPL12P18-201ENST00000437175 325 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 RPL7AP61-201ENST00000443410 636 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AC245028.2-201ENST00000458673 253 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AC108693.1-201ENST00000496068 432 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AL136038.1-201ENST00000497246 351 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms