Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RPL7L1P9-201ENST00000431298 745 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 SUMO2P8-201ENST00000434672 286 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 AC020779.1-201ENST00000478757 796 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 AC147055.1-201ENST00000509261 750 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 OR4A46P-201ENST00000527255 933 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 AC127024.5-201ENST00000580085 462 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 AC239803.2-201ENST00000610161 430 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 RPSAP73-201ENST00000614820 330 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 AP003400.2-201ENST00000624036 666 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SIX2Q9NPC8 MAPK10-338ENST00000641647 3362 ntBASIC5.58□□□□□ -1.52
SIX2Q9NPC8 AL450345.1-202ENST00000605741 3881 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AL390316.1-201ENST00000406279 553 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC093655.2-201ENST00000425735 631 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 RPL7P51-201ENST00000490532 749 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 NPM1P28-201ENST00000492269 840 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC108693.1-201ENST00000496068 432 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 RPS4XP20-201ENST00000505751 772 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC025857.1-201ENST00000525252 377 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC134349.2-201ENST00000535136 910 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 SNRPGP1-201ENST00000553864 222 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 FKBP1AP1-201ENST00000594588 318 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC005520.3-201ENST00000602874 370 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 BNIP3P35-201ENST00000604530 490 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC012467.1-201ENST00000607740 256 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC079395.2-201ENST00000610982 737 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC103798.2-201ENST00000624292 632 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 AC074101.1-201ENST00000637861 241 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 SAMMSON-209ENST00000641222 1100 ntBASIC5.57□□□□□ -1.52
SIX2Q9NPC8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SIX2Q9NPC8 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 U3.25-201ENST00000391209 220 ntBASIC5.56□□□□□ -1.52
SIX2Q9NPC8 AL035079.1-201ENST00000405210 287 ntBASIC5.56□□□□□ -1.52
SIX2Q9NPC8 SNORA11.5-201ENST00000408163 128 ntBASIC5.56□□□□□ -1.52
SIX2Q9NPC8 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.56□□□□□ -1.52
SIX2Q9NPC8 CHEK2P5-201ENST00000423877 246 ntBASIC5.56□□□□□ -1.52
SIX2Q9NPC8 AC108075.1-201ENST00000424692 529 ntBASIC5.56□□□□□ -1.52
SIX2Q9NPC8 RPS29P10-201ENST00000439197 166 ntBASIC5.56□□□□□ -1.52
SIX2Q9NPC8 Z92846.1-201ENST00000456203 268 ntBASIC5.56□□□□□ -1.52
SIX2Q9NPC8 AL133372.1-201ENST00000493565 745 ntBASIC5.56□□□□□ -1.52
SIX2Q9NPC8 AC012400.1-201ENST00000518452 381 ntBASIC5.56□□□□□ -1.52
SIX2Q9NPC8 AC027026.1-201ENST00000532323 742 ntBASIC5.56□□□□□ -1.52
SIX2Q9NPC8 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms