Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC093799.2-201ENST00000610062 578 ntBASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 AC019206.1-201ENST00000621938 425 ntBASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 AC079298.1-201ENST00000625026 1619 ntBASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KIAA1549Q9HCM3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AC092681.1-201ENST00000297369 291 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 RN7SKP16-201ENST00000410180 299 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 HYALP1-201ENST00000417674 1279 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 VN1R54P-201ENST00000435210 1049 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 RPS11P7-201ENST00000442125 465 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 TRY2P-201ENST00000448860 689 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 RPL7P61-201ENST00000451721 751 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 SNRPCP3-201ENST00000474888 476 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 MIR4691-201ENST00000583764 85 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AC008814.1-201ENST00000603797 406 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AL162574.1-201ENST00000615702 950 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 MIR7703-201ENST00000620784 77 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AC091905.4-201ENST00000623432 202 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AP001284.1-201ENST00000528393 2118 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 IRF5P1-201ENST00000504852 2164 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AC112255.1-201ENST00000624070 2493 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AL354766.1-201ENST00000423396 542 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 Z92846.1-201ENST00000456203 268 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
KIAA1549Q9HCM3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 SNORA17.1-201ENST00000362945 126 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 U3.3-201ENST00000362986 216 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AC007618.1-201ENST00000366455 732 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AC009784.1-201ENST00000426484 460 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AC093414.1-201ENST00000434712 514 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AL354714.3-201ENST00000447284 493 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 BX842559.2-201ENST00000451418 605 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AL645937.3-201ENST00000453647 936 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 RPS17P2-201ENST00000461663 408 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 RPS3AP41-201ENST00000462701 778 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 OR5D15P-201ENST00000531671 942 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AC099654.6-201ENST00000636487 512 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AC023421.1-201ENST00000590535 1785 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 NXF4-202ENST00000416098 1465 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 AC006210.2-201ENST00000367074 1545 ntBASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
KIAA1549Q9HCM3 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms