Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC002069.2-201ENST00000603580 883 ntBASIC5.92□□□□□ -1.46
USP29Q9HBJ7 AC018926.1-201ENST00000616335 435 ntBASIC5.92□□□□□ -1.46
USP29Q9HBJ7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 AC099654.8-201ENST00000637757 681 ntBASIC5.92□□□□□ -1.46
USP29Q9HBJ7 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 OR8G3P-202ENST00000641572 1255 ntBASIC5.92□□□□□ -1.46
USP29Q9HBJ7 AC079776.5-201ENST00000641920 211 ntBASIC5.92□□□□□ -1.46
USP29Q9HBJ7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 AL645568.2-201ENST00000432815 1337 ntBASIC5.92□□□□□ -1.46
USP29Q9HBJ7 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.92□□□□□ -1.46
USP29Q9HBJ7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 RNA5SP500-201ENST00000364486 119 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 RNU6-584P-201ENST00000410350 95 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AC245060.4-201ENST00000413293 1121 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 RNGTTP1-201ENST00000420965 728 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 VTI1BP4-201ENST00000427516 527 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 RPS3AP53-201ENST00000454716 778 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AC099521.1-201ENST00000482557 334 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 RN7SL205P-201ENST00000490174 284 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 RPL7L1P4-201ENST00000513004 707 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 GAPDHP62-201ENST00000515313 990 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 PCNAP4-201ENST00000532690 730 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 OSBPL9P3-201ENST00000534523 595 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AC023762.1-201ENST00000603280 584 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 RNA5SP440-201ENST00000612665 119 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AL645927.2-201ENST00000618350 349 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AL049767.1-202ENST00000637826 242 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AC112255.1-201ENST00000624070 2493 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 AC012078.1-201ENST00000405035 1646 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
USP29Q9HBJ7 RARSP1-201ENST00000542842 1418 ntBASIC5.91□□□□□ -1.46
USP29Q9HBJ7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 AC114774.1-201ENST00000507410 1770 ntBASIC5.9□□□□□ -1.46
USP29Q9HBJ7 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 CR788268.1-201ENST00000603931 1809 ntBASIC5.9□□□□□ -1.46
USP29Q9HBJ7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 MIR375-201ENST00000362103 64 ntBASIC5.9□□□□□ -1.46
USP29Q9HBJ7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 RN7SKP199-201ENST00000410325 305 ntBASIC5.9□□□□□ -1.46
USP29Q9HBJ7 MRPL53P1-201ENST00000414323 319 ntBASIC5.9□□□□□ -1.46
USP29Q9HBJ7 RAB9AP4-201ENST00000415230 609 ntBASIC5.9□□□□□ -1.46
USP29Q9HBJ7 RPL34P3-201ENST00000421454 338 ntBASIC5.9□□□□□ -1.46
USP29Q9HBJ7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 MTND2P21-201ENST00000436242 1042 ntBASIC5.9□□□□□ -1.46
USP29Q9HBJ7 PCBP2P1-201ENST00000437262 977 ntBASIC5.9□□□□□ -1.46
USP29Q9HBJ7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.9□□□□□ -1.46
USP29Q9HBJ7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms