Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 RNA5SP191-201ENST00000362585 102 ntBASIC7.86□□□□□ -1.15
SCAPERQ9BY12 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 AC093414.1-201ENST00000434712 514 ntBASIC7.86□□□□□ -1.15
SCAPERQ9BY12 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 AC128716.1-201ENST00000475129 166 ntBASIC7.86□□□□□ -1.15
SCAPERQ9BY12 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 AC019193.2-201ENST00000610012 634 ntBASIC7.86□□□□□ -1.15
SCAPERQ9BY12 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.86□□□□□ -1.15
SCAPERQ9BY12 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 AC004690.1-201ENST00000418216 328 ntBASIC7.85□□□□□ -1.15
SCAPERQ9BY12 CNOT7P1-201ENST00000429006 852 ntBASIC7.85□□□□□ -1.15
SCAPERQ9BY12 RPS29P10-201ENST00000439197 166 ntBASIC7.85□□□□□ -1.15
SCAPERQ9BY12 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 TOMM20P2-201ENST00000540082 421 ntBASIC7.85□□□□□ -1.15
SCAPERQ9BY12 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 AL132640.2-201ENST00000559968 1698 ntBASIC7.85□□□□□ -1.15
SCAPERQ9BY12 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCAPERQ9BY12 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 RSL24D1P6-201ENST00000426934 401 ntBASIC7.84□□□□□ -1.15
SCAPERQ9BY12 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 AC009027.1-201ENST00000604510 479 ntBASIC7.84□□□□□ -1.15
SCAPERQ9BY12 AC244107.2-201ENST00000611773 76 ntBASIC7.84□□□□□ -1.15
SCAPERQ9BY12 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 AP003400.3-201ENST00000624904 346 ntBASIC7.84□□□□□ -1.15
SCAPERQ9BY12 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC7.84□□□□□ -1.15
SCAPERQ9BY12 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
SCAPERQ9BY12 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 AC009480.2-201ENST00000422916 432 ntBASIC7.83□□□□□ -1.16
SCAPERQ9BY12 MTCYBP21-201ENST00000443300 1113 ntBASIC7.83□□□□□ -1.16
SCAPERQ9BY12 SCARNA20.4-201ENST00000516969 131 ntBASIC7.83□□□□□ -1.16
SCAPERQ9BY12 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 SCARNA9-201ENST00000530422 353 ntBASIC7.83□□□□□ -1.16
SCAPERQ9BY12 ASB8-204ENST00000536071 568 ntTSL 4 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 AC060780.2-201ENST00000589047 198 ntBASIC7.83□□□□□ -1.16
SCAPERQ9BY12 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC7.83□□□□□ -1.16
SCAPERQ9BY12 AC091932.2-201ENST00000623014 291 ntBASIC7.83□□□□□ -1.16
SCAPERQ9BY12 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC7.83□□□□□ -1.16
SCAPERQ9BY12 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms