Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC112198.2-201ENST00000426589 6996 ntBASIC1.64□□□□□ -2.15
SYNE1Q8NF91 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
SYNE1Q8NF91 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC1.64□□□□□ -2.15
SYNE1Q8NF91 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 RPS18P6-201ENST00000476880 458 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC090142.2-201ENST00000483263 416 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 KRTAP5-14P-201ENST00000502328 121 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 MIPEPP2-201ENST00000422560 1819 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 RPL5P25-201ENST00000441148 775 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 RPS23P9-201ENST00000448848 438 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 HPRT1P1-201ENST00000509498 657 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 TOMM20P2-201ENST00000540082 421 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 DHFRP1-201ENST00000579682 559 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 WWOX-217ENST00000620008 450 ntTSL 2 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 MIR1182-201ENST00000408363 97 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AL365220.1-201ENST00000432923 399 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC068587.1-201ENST00000483613 781 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 DUBR-205ENST00000495228 411 ntTSL 2 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC069307.1-201ENST00000602820 447 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AL353662.3-201ENST00000625131 237 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AL138820.1-201ENST00000617901 5305 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 RPL23P2-201ENST00000320371 421 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 RNU4-2-201ENST00000365668 141 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AL390774.1-201ENST00000411924 246 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 RPS27AP7-201ENST00000422792 455 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC126120.1-201ENST00000431082 470 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 RPS3AP53-201ENST00000454716 778 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC079080.1-201ENST00000479841 822 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC114774.1-201ENST00000507410 1770 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC134698.5-201ENST00000519444 336 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AL031658.2-201ENST00000616850 651 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 CASC19-281ENST00000642118 1554 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AL353625.1-202ENST00000366273 571 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 FTH1P25-201ENST00000447665 469 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 Z92846.1-201ENST00000456203 268 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 RPS17P2-201ENST00000461663 408 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 RN7SL481P-201ENST00000477764 299 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AL049539.1-201ENST00000611964 459 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC073342.3-201ENST00000624211 193 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 U3.10-201ENST00000364459 214 ntBASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC1.63□□□□□ -2.15
SYNE1Q8NF91 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms