Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 RN7SKP5-201ENST00000517045 272 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 AC105031.1-201ENST00000518550 476 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 EIF4EP5-201ENST00000528228 640 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 AC006512.2-201ENST00000543250 486 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 AC127381.1-201ENST00000555979 939 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 DPRXP4-201ENST00000578053 568 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 MIR3936-201ENST00000584304 110 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 AL591926.1-201ENST00000620542 217 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 AC083843.2-201ENST00000568248 6253 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 TCP1P3-201ENST00000414406 1498 ntBASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.2□□□□□ -1.58
NUDCD3Q8IVD9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AL022393.1-201ENST00000625142 1677 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 OR7E25P-201ENST00000344844 931 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 RPL10P10-201ENST00000403509 664 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 OR5M12P-201ENST00000423388 929 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 NAP1L4P2-201ENST00000425958 899 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AL662874.1-201ENST00000426065 230 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC244033.1-201ENST00000426826 870 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 CLUHP1-201ENST00000435012 1190 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 ARAFP2-201ENST00000440565 559 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC019185.1-201ENST00000442718 389 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC026826.3-201ENST00000561747 158 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC060766.1-201ENST00000590824 627 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC018695.5-201ENST00000605872 315 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AC103703.1-201ENST00000634783 663 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AL596275.2-207ENST00000641188 675 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUDCD3Q8IVD9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 AC106872.5-201ENST00000508856 1416 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 OR6C64P-201ENST00000419708 825 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 AC013268.2-201ENST00000420753 337 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 AL034379.1-201ENST00000423216 253 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 AC069154.1-201ENST00000432914 542 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 AL161722.2-201ENST00000434731 981 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 RPL35AP21-201ENST00000437667 333 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 GAPDHP25-201ENST00000447061 1001 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 295 ms