Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
NHLRC1Q6VVB1 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC007382.1-201ENST00000624376 2618 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 RPS3AP2-201ENST00000407190 754 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AL590806.1-201ENST00000415818 853 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 OR10T1P-201ENST00000424327 947 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 SETP10-201ENST00000424368 814 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 CACYBPP1-201ENST00000438592 684 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC023512.1-201ENST00000444513 499 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 MRE11P1-201ENST00000464884 2127 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 RPL7AP10-201ENST00000481016 791 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 OR9N1P-202ENST00000494289 481 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC018552.1-201ENST00000562099 811 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC015802.2-201ENST00000589690 189 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AL096803.3-201ENST00000609032 532 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 RPL23AP61-201ENST00000623642 466 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC021106.3-201ENST00000623925 531 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC004808.2-201ENST00000627965 773 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 NEPNP-201ENST00000404786 1371 ntBASIC5.04□□□□□ -1.6
NHLRC1Q6VVB1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 MIR375-201ENST00000362103 64 ntBASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 RN7SKP292-201ENST00000365522 317 ntBASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 AC092642.1-201ENST00000392417 425 ntBASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 HMGB1P20-201ENST00000402555 677 ntBASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 HMGN1P20-201ENST00000411849 300 ntBASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 RPA2P2-201ENST00000419698 796 ntBASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 AC007161.1-204ENST00000423039 460 ntBASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.03□□□□□ -1.6
NHLRC1Q6VVB1 MTND2P21-201ENST00000436242 1042 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms