Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC093763.2-201ENST00000505334 1223 ntBASIC6.4□□□□□ -1.38
CTR9Q6PD62 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.4□□□□□ -1.38
CTR9Q6PD62 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.4□□□□□ -1.38
CTR9Q6PD62 AC111000.6-201ENST00000514471 709 ntBASIC6.4□□□□□ -1.38
CTR9Q6PD62 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.4□□□□□ -1.38
CTR9Q6PD62 AC005341.1-201ENST00000571086 708 ntBASIC6.4□□□□□ -1.38
CTR9Q6PD62 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.4□□□□□ -1.38
CTR9Q6PD62 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.4□□□□□ -1.38
CTR9Q6PD62 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.4□□□□□ -1.38
CTR9Q6PD62 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CTR9Q6PD62 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CTR9Q6PD62 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CTR9Q6PD62 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CTR9Q6PD62 AC092376.2-201ENST00000622621 4116 ntBASIC6.4□□□□□ -1.39
CTR9Q6PD62 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.4□□□□□ -1.39
CTR9Q6PD62 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.4□□□□□ -1.39
CTR9Q6PD62 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.4□□□□□ -1.39
CTR9Q6PD62 PCAT14-202ENST00000627127 3935 ntBASIC6.4□□□□□ -1.39
CTR9Q6PD62 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CTR9Q6PD62 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
CTR9Q6PD62 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.4□□□□□ -1.39
CTR9Q6PD62 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTR9Q6PD62 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTR9Q6PD62 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTR9Q6PD62 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTR9Q6PD62 SNORA67-201ENST00000384423 137 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 MIR223-201ENST00000385204 110 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 RNA5SP487-201ENST00000410186 122 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 RN7SKP273-201ENST00000411392 314 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 NDUFB4P8-201ENST00000435351 367 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 MYO5BP2-201ENST00000449815 1277 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 RN7SL222P-201ENST00000476452 299 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC015864.1-201ENST00000496512 544 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC111000.5-201ENST00000506559 1178 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 SCARNA20.4-201ENST00000516969 131 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC027308.1-201ENST00000517993 110 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC004825.1-201ENST00000555068 586 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 OR11J2P-201ENST00000555298 907 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC127381.1-201ENST00000555979 939 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC007448.1-201ENST00000582714 234 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC069307.1-201ENST00000602820 447 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC010809.3-201ENST00000621310 641 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 CYP4F35P-202ENST00000636121 390 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC079097.1-201ENST00000512187 1399 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CTR9Q6PD62 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTR9Q6PD62 AC011493.1-201ENST00000596753 1632 ntBASIC6.39□□□□□ -1.39
CTR9Q6PD62 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CTR9Q6PD62 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 SNORD56.6-201ENST00000384569 71 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 OR6C64P-201ENST00000419708 825 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 AL627308.1-201ENST00000435693 821 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 EEF1B2P5-201ENST00000444820 548 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 FAR2P1-206ENST00000449736 709 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 AC006499.3-201ENST00000506077 748 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 OR4A17P-201ENST00000526032 904 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 AC079064.1-201ENST00000528365 362 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 YWHABP2-201ENST00000540201 713 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 SETP1-201ENST00000556014 845 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 AL390334.1-201ENST00000556395 450 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 NMNAT1P5-201ENST00000559657 841 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 AC092944.2-201ENST00000605443 889 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 AL139124.1-201ENST00000609123 421 ntBASIC6.38□□□□□ -1.39
CTR9Q6PD62 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.38□□□□□ -1.39
CTR9Q6PD62 AC099654.6-201ENST00000636487 512 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms