Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC021106.3-201ENST00000623925 531 ntBASIC5.12□□□□□ -1.59
RIF1Q5UIP0 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC5.12□□□□□ -1.59
RIF1Q5UIP0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RIF1Q5UIP0 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RIF1Q5UIP0 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC5.12□□□□□ -1.59
RIF1Q5UIP0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.12□□□□□ -1.59
RIF1Q5UIP0 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.12□□□□□ -1.59
RIF1Q5UIP0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.12□□□□□ -1.59
RIF1Q5UIP0 AC093765.1-201ENST00000603758 881 ntBASIC5.12□□□□□ -1.59
RIF1Q5UIP0 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RIF1Q5UIP0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 MORF4L1P3-201ENST00000525966 950 ntBASIC5.11□□□□□ -1.59
RIF1Q5UIP0 OR7E128P-201ENST00000532736 1024 ntBASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AC017100.2-201ENST00000584628 355 ntBASIC5.11□□□□□ -1.59
RIF1Q5UIP0 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AL627230.1-201ENST00000613077 211 ntBASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AL591926.8-201ENST00000616876 211 ntBASIC5.11□□□□□ -1.59
RIF1Q5UIP0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AL359955.1-201ENST00000455242 3275 ntBASIC5.11□□□□□ -1.59
RIF1Q5UIP0 ZNF969P-201ENST00000510345 2341 ntBASIC5.11□□□□□ -1.59
RIF1Q5UIP0 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AL589993.1-201ENST00000407450 2524 ntBASIC5.11□□□□□ -1.59
RIF1Q5UIP0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AL021331.1-201ENST00000402817 582 ntBASIC5.11□□□□□ -1.59
RIF1Q5UIP0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 RAD23BP1-201ENST00000421404 1227 ntBASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.11□□□□□ -1.59
RIF1Q5UIP0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.11□□□□□ -1.59
RIF1Q5UIP0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 ATP5F1P3-201ENST00000397213 657 ntBASIC5.1□□□□□ -1.59
RIF1Q5UIP0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 AL136455.1-201ENST00000441083 1240 ntBASIC5.1□□□□□ -1.59
RIF1Q5UIP0 RPS7P6-201ENST00000485777 579 ntBASIC5.1□□□□□ -1.59
RIF1Q5UIP0 AC073581.1-201ENST00000519036 575 ntBASIC5.1□□□□□ -1.59
RIF1Q5UIP0 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 AC006133.1-201ENST00000617106 264 ntBASIC5.1□□□□□ -1.59
RIF1Q5UIP0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 AC090220.1-201ENST00000593078 1699 ntBASIC5.1□□□□□ -1.59
RIF1Q5UIP0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RIF1Q5UIP0 AC006600.2-201ENST00000624834 2506 ntBASIC5.1□□□□□ -1.59
RIF1Q5UIP0 SNORA11.1-201ENST00000408133 129 ntBASIC5.09□□□□□ -1.59
RIF1Q5UIP0 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.09□□□□□ -1.59
RIF1Q5UIP0 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RIF1Q5UIP0 EEF1A1P1-201ENST00000447052 739 ntBASIC5.09□□□□□ -1.59
RIF1Q5UIP0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.09□□□□□ -1.59
RIF1Q5UIP0 AP001880.2-201ENST00000538233 448 ntBASIC5.09□□□□□ -1.59
RIF1Q5UIP0 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.09□□□□□ -1.59
RIF1Q5UIP0 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.09□□□□□ -1.59
RIF1Q5UIP0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RIF1Q5UIP0 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RIF1Q5UIP0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.09□□□□□ -1.59
RIF1Q5UIP0 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
RIF1Q5UIP0 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms