Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM1Q2M3G4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 AL133270.1-201ENST00000402635 279 ntBASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 AC104837.2-201ENST00000427236 424 ntBASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 LINC02210-201ENST00000444561 288 ntBASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 AP001922.4-201ENST00000526967 290 ntBASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 AP000676.2-201ENST00000529711 301 ntBASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 MIR4480-201ENST00000582492 71 ntBASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 MIR4691-201ENST00000583764 85 ntBASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 AC093799.2-201ENST00000610062 578 ntBASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 AC244107.2-201ENST00000611773 76 ntBASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 AC099654.6-201ENST00000636487 512 ntBASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM1Q2M3G4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 AP005435.3-201ENST00000531260 3198 ntBASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 GJA6P-201ENST00000415117 1042 ntBASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 RPL34P27-201ENST00000428810 349 ntBASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 RPS3AP53-201ENST00000454716 778 ntBASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 RPS3AP41-201ENST00000462701 778 ntBASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 RPS23P1-201ENST00000491662 432 ntBASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 AC105036.1-201ENST00000566222 271 ntBASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 AC108738.1-201ENST00000603703 237 ntBASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SHROOM1Q2M3G4 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AL158152.1-201ENST00000602652 1435 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 IRF5P1-201ENST00000504852 2164 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 RN7SKP115-201ENST00000363177 317 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 RNA5SP455-201ENST00000365190 119 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 MIR600-201ENST00000385007 98 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 U3.23-201ENST00000391132 200 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 HSPA8P15-201ENST00000401676 786 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AL445213.1-201ENST00000412589 747 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AL360081.1-201ENST00000428299 555 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AL049745.1-201ENST00000433953 286 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AC073465.2-201ENST00000440938 498 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 TRY2P-201ENST00000448860 689 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 MIR4420-201ENST00000583944 77 ntBASIC6.17□□□□□ -1.42
SHROOM1Q2M3G4 AC011447.4-201ENST00000587562 111 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms