Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RPS27P20-201ENST00000492051 246 ntBASIC7□□□□□ -1.29
SOX4Q06945 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7□□□□□ -1.29
SOX4Q06945 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC7□□□□□ -1.29
SOX4Q06945 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7□□□□□ -1.29
SOX4Q06945 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7□□□□□ -1.29
SOX4Q06945 AC018797.1-201ENST00000510791 255 ntBASIC7□□□□□ -1.29
SOX4Q06945 RNU6-718P-201ENST00000516166 105 ntBASIC7□□□□□ -1.29
SOX4Q06945 IGHV3-57-201ENST00000520143 280 ntBASIC7□□□□□ -1.29
SOX4Q06945 IGHVIII-38-1-201ENST00000521454 282 ntBASIC7□□□□□ -1.29
SOX4Q06945 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7□□□□□ -1.29
SOX4Q06945 OR8Q1P-201ENST00000526467 655 ntBASIC7□□□□□ -1.29
SOX4Q06945 OR5AZ1P-201ENST00000527448 943 ntBASIC7□□□□□ -1.29
SOX4Q06945 AP001646.1-201ENST00000527936 915 ntBASIC7□□□□□ -1.29
SOX4Q06945 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7□□□□□ -1.29
SOX4Q06945 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC7□□□□□ -1.29
SOX4Q06945 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7□□□□□ -1.29
SOX4Q06945 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC7□□□□□ -1.29
SOX4Q06945 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC7□□□□□ -1.29
SOX4Q06945 AC010547.7-201ENST00000570323 333 ntBASIC7□□□□□ -1.29
SOX4Q06945 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC7□□□□□ -1.29
SOX4Q06945 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7□□□□□ -1.29
SOX4Q06945 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7□□□□□ -1.29
SOX4Q06945 AC073046.2-201ENST00000604756 527 ntBASIC7□□□□□ -1.29
SOX4Q06945 AC069545.1-201ENST00000605671 358 ntBASIC7□□□□□ -1.29
SOX4Q06945 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7□□□□□ -1.29
SOX4Q06945 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7□□□□□ -1.29
SOX4Q06945 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC7□□□□□ -1.29
SOX4Q06945 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7□□□□□ -1.29
SOX4Q06945 AC025594.3-201ENST00000613068 790 ntBASIC7□□□□□ -1.29
SOX4Q06945 U4.5-201ENST00000617137 123 ntBASIC7□□□□□ -1.29
SOX4Q06945 MIR6721-201ENST00000617181 87 ntBASIC7□□□□□ -1.29
SOX4Q06945 AL591926.1-201ENST00000620542 217 ntBASIC7□□□□□ -1.29
SOX4Q06945 AC015726.3-201ENST00000624501 418 ntBASIC7□□□□□ -1.29
SOX4Q06945 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7□□□□□ -1.29
SOX4Q06945 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SOX4Q06945 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SOX4Q06945 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SOX4Q06945 MAPK10-383ENST00000642032 3390 ntBASIC7□□□□□ -1.29
SOX4Q06945 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7□□□□□ -1.29
SOX4Q06945 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
SOX4Q06945 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX4Q06945 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SOX4Q06945 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC083806.2-201ENST00000617795 2685 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX4Q06945 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SOX4Q06945 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SOX4Q06945 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 RNU1-65P-201ENST00000363919 148 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 RNU6-1042P-201ENST00000384204 107 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 SNORD65-201ENST00000391079 73 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 RPL21P50-201ENST00000417698 477 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 AC023128.2-201ENST00000420880 1223 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 Z99497.1-201ENST00000421282 135 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SOX4Q06945 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
SOX4Q06945 AL022400.1-201ENST00000423946 935 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX4Q06945 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX4Q06945 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX4Q06945 ST13P20-201ENST00000447996 1065 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC005017.1-201ENST00000482002 490 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 NCOR1P1-202ENST00000486162 291 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 AC109486.1-201ENST00000486833 374 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX4Q06945 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SOX4Q06945 AC083906.1-201ENST00000509298 406 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC074344.1-201ENST00000512823 224 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX4Q06945 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX4Q06945 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX4Q06945 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.99□□□□□ -1.29
SOX4Q06945 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX4Q06945 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.99□□□□□ -1.29
SOX4Q06945 ANP32BP3-201ENST00000559213 706 ntBASIC6.99□□□□□ -1.29
SOX4Q06945 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.99□□□□□ -1.29
SOX4Q06945 LINC00556-201ENST00000569603 412 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms