Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.42□□□□□ -1.54
CBX1P83916 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.42□□□□□ -1.54
CBX1P83916 RHEBP2-201ENST00000450289 600 ntBASIC5.42□□□□□ -1.54
CBX1P83916 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX1P83916 AC093166.2-201ENST00000455969 1017 ntBASIC5.42□□□□□ -1.54
CBX1P83916 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.42□□□□□ -1.54
CBX1P83916 AC010469.1-201ENST00000463864 576 ntBASIC5.42□□□□□ -1.54
CBX1P83916 RN7SL83P-201ENST00000468131 297 ntBASIC5.42□□□□□ -1.54
CBX1P83916 AC016687.1-201ENST00000482574 353 ntBASIC5.42□□□□□ -1.54
CBX1P83916 AC113430.1-201ENST00000506872 718 ntBASIC5.42□□□□□ -1.54
CBX1P83916 AC095052.1-201ENST00000509955 863 ntBASIC5.42□□□□□ -1.54
CBX1P83916 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.42□□□□□ -1.54
CBX1P83916 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.42□□□□□ -1.54
CBX1P83916 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.42□□□□□ -1.54
CBX1P83916 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.42□□□□□ -1.54
CBX1P83916 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.42□□□□□ -1.54
CBX1P83916 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX1P83916 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.42□□□□□ -1.54
CBX1P83916 AC063977.5-201ENST00000601044 974 ntBASIC5.42□□□□□ -1.54
CBX1P83916 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX1P83916 SMIM12P1-201ENST00000603004 274 ntBASIC5.42□□□□□ -1.54
CBX1P83916 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX1P83916 AC090607.5-201ENST00000615692 224 ntBASIC5.42□□□□□ -1.54
CBX1P83916 AC108359.1-201ENST00000616451 1211 ntBASIC5.42□□□□□ -1.54
CBX1P83916 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX1P83916 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CBX1P83916 AC068213.1-201ENST00000625124 226 ntBASIC5.42□□□□□ -1.54
CBX1P83916 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CBX1P83916 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CBX1P83916 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CBX1P83916 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CBX1P83916 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CBX1P83916 CASC19-238ENST00000641523 1558 ntBASIC5.42□□□□□ -1.54
CBX1P83916 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CBX1P83916 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CBX1P83916 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CBX1P83916 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.41□□□□□ -1.54
CBX1P83916 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CBX1P83916 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.41□□□□□ -1.54
CBX1P83916 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CBX1P83916 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.41□□□□□ -1.54
CBX1P83916 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CBX1P83916 AC027279.1-201ENST00000568885 4284 ntBASIC5.41□□□□□ -1.54
CBX1P83916 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CBX1P83916 OR56A4-201ENST00000330728 1209 ntBASIC5.41□□□□□ -1.54
CBX1P83916 RNA5SP223-201ENST00000365174 120 ntBASIC5.41□□□□□ -1.54
CBX1P83916 RNA5SP85-201ENST00000365378 119 ntBASIC5.41□□□□□ -1.54
CBX1P83916 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.41□□□□□ -1.54
CBX1P83916 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.41□□□□□ -1.54
CBX1P83916 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.41□□□□□ -1.54
CBX1P83916 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.41□□□□□ -1.54
CBX1P83916 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.41□□□□□ -1.54
CBX1P83916 AL450263.2-201ENST00000439400 589 ntBASIC5.41□□□□□ -1.54
CBX1P83916 AL645936.1-201ENST00000441979 518 ntBASIC5.41□□□□□ -1.54
CBX1P83916 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.41□□□□□ -1.54
CBX1P83916 CTSLP6-201ENST00000458273 1002 ntBASIC5.41□□□□□ -1.54
CBX1P83916 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.41□□□□□ -1.54
CBX1P83916 AC091544.1-201ENST00000484702 348 ntBASIC5.41□□□□□ -1.54
CBX1P83916 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.41□□□□□ -1.54
CBX1P83916 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.41□□□□□ -1.54
CBX1P83916 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.41□□□□□ -1.54
CBX1P83916 ENPP7P9-201ENST00000514456 627 ntBASIC5.41□□□□□ -1.54
CBX1P83916 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.41□□□□□ -1.54
CBX1P83916 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.41□□□□□ -1.54
CBX1P83916 RPL23AP53-201ENST00000521854 457 ntBASIC5.41□□□□□ -1.54
CBX1P83916 IGLV3-30-201ENST00000524362 298 ntBASIC5.41□□□□□ -1.54
CBX1P83916 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.41□□□□□ -1.54
CBX1P83916 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CBX1P83916 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.41□□□□□ -1.54
CBX1P83916 HSPE1P2-201ENST00000554777 306 ntBASIC5.41□□□□□ -1.54
CBX1P83916 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.41□□□□□ -1.54
CBX1P83916 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CBX1P83916 AL589765.6-201ENST00000601909 549 ntBASIC5.41□□□□□ -1.54
CBX1P83916 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.41□□□□□ -1.54
CBX1P83916 AC055839.1-201ENST00000634467 498 ntBASIC5.41□□□□□ -1.54
CBX1P83916 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CBX1P83916 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CBX1P83916 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
CBX1P83916 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
CBX1P83916 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CBX1P83916 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CBX1P83916 AC023421.1-201ENST00000590535 1785 ntBASIC5.4□□□□□ -1.54
CBX1P83916 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CBX1P83916 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CBX1P83916 OR7E25P-201ENST00000344844 931 ntBASIC5.4□□□□□ -1.54
CBX1P83916 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CBX1P83916 SNORA21-201ENST00000362423 132 ntBASIC5.4□□□□□ -1.54
CBX1P83916 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.4□□□□□ -1.54
CBX1P83916 RNA5SP372-201ENST00000390836 115 ntBASIC5.4□□□□□ -1.54
CBX1P83916 YWHAZP4-201ENST00000392459 708 ntBASIC5.4□□□□□ -1.54
CBX1P83916 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CBX1P83916 AL512422.1-201ENST00000407033 553 ntBASIC5.4□□□□□ -1.54
CBX1P83916 UBTFL2-201ENST00000411859 1191 ntBASIC5.4□□□□□ -1.54
CBX1P83916 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.4□□□□□ -1.54
CBX1P83916 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.4□□□□□ -1.54
CBX1P83916 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.4□□□□□ -1.54
CBX1P83916 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CBX1P83916 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.4□□□□□ -1.54
CBX1P83916 OR6R1P-201ENST00000431838 940 ntBASIC5.4□□□□□ -1.54
CBX1P83916 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms